Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1027 ATGTCCCGTAGTGAAAAGGAATTCCACCAATCAAGATTCCCATACACCAATTTTCATCTTCACAAATCATTTCTCAATATCTCCTATAAATATGCATCATTATTCTCACTCACAAAACTCAAACCCTTCTATTTTCTTCTTTTTTCCATTTCCATGGCTTTCACAACCATGCCTTCTTCACTCACAAACTCCACTTCTTCCCCAACTATGCTTCTTCCTCCCATCTCTCATCATAACAATCCAAATAAACTCATCGTCAATAAACCCCAACGCAAACTCCTACACTTAACCGTTGCAAATGTTGCAAGTCCTTCATTACCCATCATTACCCCACCAACACCGGAGGAACAACTCCCAGGAACCACCGCCGGCCGCCACCACCACCACCATGTTGCATGGACTAGTATCTCGCAGGAGAGCTGGGAAGGAGAGTTACAAGTTGAAGGGCATATACCACCATGGCTGAATGGAACGTACCTGAGGAATGGGCCTGGGATGTGGCACATAGGAGACTATGACTTCCGACACCTCTTCGACGGTTACGCTACGGTGGTCAAGCTACGACTCCAGGAAGGCCGGTTATTCGCCGGCCACCGTCAAATTGAATCGGAGGCGTACCGTGCGGCGAAGAAGAACCAGAAGATATGCTACCGGGAGTTTTCGGAAGTGCCAAAAGCGGCGAATTTCCTGGCGTATGTGGGGGAGCTGGCGAGCCTGTTCTCCGGCGCGTCGCTGACGGACAACGCGAACACCGGGGTGGTGAAGCTTGGCGACGGGAGGGTGGTGTGTCTGACGGAGACGCAGAAGGGGTCGATTGTGATTGACCCTGAGACGCTAGAAACGGTGGGGAAGTTCGAGTACAGTGACTCGTTGGGGGGTCTGATTCACTCTGCGCACCCCGTTGTGACGGATAAGGAGTTTGTGACGTTGTTGCCGGATTTGGTGAGAGCAGGGTACCTTGTGGTGAGGATGGAGCCCGGTACCAATGAGAGGAGGGTAATTGGGCGGGTCAATTGCCGGGGCGGGTCTTCGCCCGGTTGGGTTCACTCTTTTCCTGTCACCGAACACTATGTTGTTGTGCCCGAAATGCCGTTGAGGTACTGTGCTCAGAATCTGCTCAAGGCTGAGCCTACTCCTTTGTATAAGTTTGAGTGGCACCCTCAGTCTAAAGCTTTTATGCATGTCATGTGCAAGACCAGTGGAAATATTGTGGCAAGTGTGGAAGTACCTCTGTTTGTTACTTTCCATTTCATTAATGCTTATGAGGAGGAAGACGAAGATGGGAGGGTGACGGCCATTATTGCCGACTGTTGTGAGCATAATTCGGATCCTACCATTCTTGATAGACTTAGGTTACAGAACCTTCGTTCTTTTAATGGTGAAGATGTTCTACCCGATGCTAGGGTTGGACGGTTCAGAATACCACTGGATGGAAGTCCATATGGAGAACTAGATGCAGCATTGGACCCAAATGAACATGGGAAAGGCATGGACATGTGCAGCATAAACCCTAATCATCTAGGAAAGAAATACAGATATGCCTATGCTTGTGGAGCACAGCGACCTTGTAACTTCCCCAACACACTCACCAAGCTTGATTTAGAATTGAAAAAGGCTACGAACTGGCATGAAGAAGGTGCCGTGCCCTCAGAACCATTCTTTGTTGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTGGTAATCTCCATTGTCAGCGAGAAAAATGGAGAAGGGTATGCGTTGCTGTTGGATGGTTCCACTTTTGAAGAGATTGCTAGGGCTAAGTTCCCTTATGGACTTCCCTATGGGTTGCATGGATGCTGGGTTCCCAAGGAGTAA 1842 0.4919 MSRSEKEFHQSRFPYTNFHLHKSFLNISYKYASLFSLTKLKPFYFLLFSISMAFTTMPSSLTNSTSSPTMLLPPISHHNNPNKLIVNKPQRKLLHLTVANVASPSLPIITPPTPEEQLPGTTAGRHHHHHVAWTSISQESWEGELQVEGHIPPWLNGTYLRNGPGMWHIGDYDFRHLFDGYATVVKLRLQEGRLFAGHRQIESEAYRAAKKNQKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPETLETVGKFEYSDSLGGLIHSAHPVVTDKEFVTLLPDLVRAGYLVVRMEPGTNERRVIGRVNCRGGSSPGWVHSFPVTEHYVVVPEMPLRYCAQNLLKAEPTPLYKFEWHPQSKAFMHVMCKTSGNIVASVEVPLFVTFHFINAYEEEDEDGRVTAIIADCCEHNSDPTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGELDAALDPNEHGKGMDMCSINPNHLGKKYRYAYACGAQRPCNFPNTLTKLDLELKKATNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSEKNGEGYALLLDGSTFEEIARAKFPYGLPYGLHGCWVPKE* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1027 613 Pfam Retinal pigment epithelial membrane protein 137 611 IPR004294 GO:0016702
Vra5g1027 613 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 123 612 - -
Vra5g1027 613 PANTHER BETA-CAROTENE DIOXYGENASE 123 612 IPR004294 GO:0016702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1027 K17913 - gmx:100814148 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1027 5 16677111 16680355 Vra5g1027 5 16677111 16680355 ECH