Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1025 ATGGCTCATCTCTTCAGGGACCTATCATTGGGCCATTCCAAGAGAGACACAACGCCGCCTACCATAATGCCTCCAAAACCTTCCGCCCTTTCTTCCGCTGACGACCTCCCTTCTCCGCTCGGCCAACTCGCCGCCAACCTTTCCGATTCCGACCTTTCCTTAACAGCCTTCGAGATCTTCGTTGCCGCCTGCCGCACCTCCTCCGGCAAGCCTCTCAGTTCCATCCCTAATCACTCCTCTGCCAATTCACCCGGCCAGAACTCGCCCAACTCGCAAGCACTCCAGCGATCCATCACTTCCACCGCCGCCAGCAAGGTTAAGAAGGCCTTCGGCTTGAAATCGCCTGGTTCGGGCTCCAGAAAGAGTCCTGGCTCCGGTTCGGCTTCCGGTTCGGGCCAGGGAAAGCCGAAGCGACCGTTAACAGTAGGAGAACTCATGCGGAACCAGATGAGGGTTTCCGAAGCCATGGATTCGCGCGTGAGACGCGCTCTTCTCAGGATTTCCGCTGGCCAGGTCGGAAGAAGGATTGAGTCTGTGGTGGTTCCGCTTGAGTTGCTGCAGCAACTCAAGGCTTCGGATTTTACTGATCAGCAAGAGTACGTTGAGTGGCAGAAAAGAACCTTGAAGGTTCTCGAGGCTGGTTTAATTTTGCATCCACAAATTCCCTTGGATAAGTCGAATTCTGCGGCACAGCGTCTGCGGCAGATTATTCATGCTGCATTGGATAAGCCTATAGAAACCGGGAAGAATACTGAATCTATGCAGGTTCTTCGTAGTGCTGTCATGTCTCTTGCAAATCGGTCGTATGATGGATCTTATGCTGATTCATGCCACTGGGCAGATGGGATTCCTCTGAATCTGCGGCTTTATGAAATGCTTTTGCAATCATGCTTTGATGCTAATGATGAATCGTCTATTATTGAGGAATTTGATGAGCTGATGGAACAAATAAAGAAGACCTGGGGTATCCTTGGGTTAAATCAGACGTTGCATAATCTTTGTTTCACTTGGGTTTTGTTTCATCGGTTTGTTGTGACTGGCCAGGCGGATTTGGAACTGCTATCTGCTGCTGATGGCCAGCTGGCAGAAGTTGCAAAAGATGCGAAGACAACAAAAGATGCAGAATATTCCAAAGTTTTGAGCTCTACGTTGACTTCTATATTGGGATGGGCTGAGAAAAGGCTCCTTGCATATCATGAAACTTTTGACCGGGGTAATGTTGAAACCATGCAGGGCATAGTCTCTTTAGGGGTAGCCGCAGCTAAGATTTTGGTTGAGGATATATCCAATGAGTATCGCCGGAGGAGAAGAAATGATGTCAATGTGGCACGTGAAAGAATTGAAACCTACATCAGGTCATCACTACGCACTGCTTTTGCCCAGATAATGGAGAAGGCAGACTCCAGCAGGAGAGCATCCAAAAATCAGCCAAATGCTCTCCCTGTCCTTGCCATCCTTGCGAAGGATGTAGGTAGCCTGGCAACCAATGAAAAACAAGTCTTCAGTCCAATACTTAAGAGGTGGCATCCTTTGGCAGCAGGTCTTGCTGTGGCCACCCTCCACTCATGCTATGGAAACGAATTAAAGCAGTTCATATCAGGTATCACAGAATTGACACCTGATGCGGTTCAAGTGTTGAGAGCTGCCGATCAGTTAGAGAAAGACCTTGTGCAGATAGCTGTGGAGGATTCAGTGGAAAGCGATGATGGAGGTAAAGCAATTATCCGTGAGATGCCTCCTTATGAGGCCGAAGGGGCAATTGCCAACCTTGTGAAAATATGGATTAAAACTAGAATAGACAGACTAAAGGAGTGGGTCGATAGGAATCTGCAGCAAGAGGTTTGGAGTCCTCAAGCAAATCAGGAAGGATATGCTCCATCTGCTGTTGATGTTTTGCGGATTATAAATGAGACATTGGATGCTTTCTTTCAGCTTCCGATACCCATGCATCCTGCAATGCTTCCTGAAGTGATGAATGGCCTTGACAAATGCCTTCAGTATTATGTCATCAAAGCAAAATCTGGCTGTGGATCACGAAACACATTTCTTCCAACAATGCCAGCATTGACCAGGTGCACTATCGGTTCAAAGTTTCAGGGCTTTGGGAAGAAAAAAGATAAATCTCCAAATCCTCAGAAGAGAAACCCTCAGGTTGCAACAAATGGGGATAGCTCTTCTGGAATACCACAACTCTGTGTTCGCATTAATACTTTGCAGTGGATCCTGGGTGAATTTGATGTTCTGGAAAAAAGAATAATTACCCTTCTACGGAACTCTGAATCTGCTCATGTGGAAGATTTTTCAAATGGATTAGCAAAGAAGTTTGAACTATCTCCAGCTGCGTGTCTTGAAGGAATTCAGCAACTCTGCGAGGCTGCAGCCTATAGAGTTGTCTTTCATGATCTAAGCCATGTTTTATTGGATGGTTTGTACGTTGGGGATCCAGCATCTTCAAGAATTGAGCCATACCTTCAGGAACTTGAGCGGAAATTAATGTTCATTTCAGATACTGTTCATGAAAGAATTCGCACACGAATTGTTACTGAAATAATGAGAGCTTCCTTTGATGGATTCTTGCTTGTATTGCTTGCTGGAGGTCCCTCCCGTGCTTTTAACCGGAAGGATTCTCAGATCATCGAGGATGATTTCAAATTTCTGAAGGAATTGTTTTGGGCAAATGGGGATGGCTTGCCTTCTGAATTAATAGATAAGTTTTCAACAACTGCGAGGTCTATCCTTCCCCTTTTCAGAACTGACACAGAGACCCTCATAGAGCAGTTTAGACGGTTGACCATGGAGACATATAAATCCTCCGCCAGGTCTAAACTTCCATTACCTCCCACTTCAGGACAGTGGAATCCGTCAGAACCAAACACATTGTTACGTGTATTATGTTATAGAAATGATGAATCAGCTTCCAAGTTTCTGAAAAAGGCATATGATCTACCTAAGAAACTTTGA 2961 0.4603 MAHLFRDLSLGHSKRDTTPPTIMPPKPSALSSADDLPSPLGQLAANLSDSDLSLTAFEIFVAACRTSSGKPLSSIPNHSSANSPGQNSPNSQALQRSITSTAASKVKKAFGLKSPGSGSRKSPGSGSASGSGQGKPKRPLTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESVVVPLELLQQLKASDFTDQQEYVEWQKRTLKVLEAGLILHPQIPLDKSNSAAQRLRQIIHAALDKPIETGKNTESMQVLRSAVMSLANRSYDGSYADSCHWADGIPLNLRLYEMLLQSCFDANDESSIIEEFDELMEQIKKTWGILGLNQTLHNLCFTWVLFHRFVVTGQADLELLSAADGQLAEVAKDAKTTKDAEYSKVLSSTLTSILGWAEKRLLAYHETFDRGNVETMQGIVSLGVAAAKILVEDISNEYRRRRRNDVNVARERIETYIRSSLRTAFAQIMEKADSSRRASKNQPNALPVLAILAKDVGSLATNEKQVFSPILKRWHPLAAGLAVATLHSCYGNELKQFISGITELTPDAVQVLRAADQLEKDLVQIAVEDSVESDDGGKAIIREMPPYEAEGAIANLVKIWIKTRIDRLKEWVDRNLQQEVWSPQANQEGYAPSAVDVLRIINETLDAFFQLPIPMHPAMLPEVMNGLDKCLQYYVIKAKSGCGSRNTFLPTMPALTRCTIGSKFQGFGKKKDKSPNPQKRNPQVATNGDSSSGIPQLCVRINTLQWILGEFDVLEKRIITLLRNSESAHVEDFSNGLAKKFELSPAACLEGIQQLCEAAAYRVVFHDLSHVLLDGLYVGDPASSRIEPYLQELERKLMFISDTVHERIRTRIVTEIMRASFDGFLLVLLAGGPSRAFNRKDSQIIEDDFKFLKELFWANGDGLPSELIDKFSTTARSILPLFRTDTETLIEQFRRLTMETYKSSARSKLPLPPTSGQWNPSEPNTLLRVLCYRNDESASKFLKKAYDLPKKL* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1025 986 MobiDBLite consensus disorder prediction 700 725 - -
Vra5g1025 986 MobiDBLite consensus disorder prediction 1 35 - -
Vra5g1025 986 MobiDBLite consensus disorder prediction 68 142 - -
Vra5g1025 986 MobiDBLite consensus disorder prediction 118 134 - -
Vra5g1025 986 PANTHER PROTEIN UNC-13 HOMOLOG 2 986 IPR008528 -
Vra5g1025 986 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 543 686 IPR014770 -
Vra5g1025 986 MobiDBLite consensus disorder prediction 68 104 - -
Vra5g1025 986 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 817 927 IPR014772 -
Vra5g1025 986 PANTHER ELONGATION FACTOR TS (DUF810) 2 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1025 Vra-Chr5 16648628 16653800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1025 - - gmx:100814675 1807.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1025 5 16648628 16653800 Vra5g1025 5 16648628 16653800 ECH