Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1022 ATGTTCTCTTCAATCCTAAATTCTAATCAACCTAGGGATAAGAAACAAAAGGGAGAATGGTTCGCAGGGAGCTTCAAGGCAGAGAACTTCATTCCAGGTCTTGTTATAGGTTTCATTTTTGGGTTGTTGTTAGATTTAACGAAGCCCAGTAGAAATCACTTGTCCAAGAAACAATTGTCATCTACCAAGCTTCAAGAGAAACTCTCAGTCTCCAGCAATGGTGACCGAGAACTTAAAATGGTTCTGGTCGTTCGACAAGACTTGAAGATGAAATCTGGAAAGATTGCATCTCAATGTGCTCATGCTGCAACTGGCATGTATGCTGAGTTAATGCAAAGTGATAGGTCTCTTCTGAGACAATGGGAACAGTGTGGCCAGCCCAAAATTGTTGTGACTTGTAGGAATCAACAAGAGATGAATAAACTGAAGGACGCAGCTGAGAGTATTGGCCTTCCTACATTTGTTGTTGCTGACGCAGGAAGAACACAGGTTTCGGCAGGATCAAAAACTGTTCTTGCTGTTGGACCTGGACCAAAATCATCTGTGGACGCGGTGACTGGTAGATTGGCACTGCTTTGA 579 0.4301 MFSSILNSNQPRDKKQKGEWFAGSFKAENFIPGLVIGFIFGLLLDLTKPSRNHLSKKQLSSTKLQEKLSVSSNGDRELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRSLLRQWEQCGQPKIVVTCRNQQEMNKLKDAAESIGLPTFVVADAGRTQVSAGSKTVLAVGPGPKSSVDAVTGRLALL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1022 192 SUPERFAMILY Peptidyl-tRNA hydrolase II 77 192 IPR023476 -
Vra5g1022 192 Gene3D Bit1 73 192 IPR023476 -
Vra5g1022 192 CDD PTH2 79 192 IPR002833 GO:0004045
Vra5g1022 192 PANTHER PEPTIDYL-TRNA HYDROLASE 2 8 192 IPR002833 GO:0004045
Vra5g1022 192 Pfam Peptidyl-tRNA hydrolase PTH2 78 192 IPR002833 GO:0004045
Vra5g1022 192 PANTHER PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIAL 8 192 - -
Vra5g1022 192 TIGRFAM arch_pth2: peptidyl-tRNA hydrolase 78 192 IPR002833 GO:0004045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1022 K04794 - gmx:100527852 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1022 5 16637507 16640522 Vra5g1022 5 16637507 16640522 ECH