Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1017 ATGGAGCAGAATAAGCAAAAGCTTCGAAAGGCTGTGTCAGACGTGTCGAGTGAAATTGAGAAATACTATAGCGAGTTGAAGTTGGAGAGGCAAGAACTTGGTGCGATTGAAGAGGTGGAACAAGCTGAATGTCAGTGTTGTGGATTGAAGGAGGATTGCACTTCGGTTTATATCACAGAGGTTGAAGAGTGTTACTGTGGGAAGTGGGTTTGTGGGCTTTGTTCTGAAGCTGTTAAAGAAAGAGTAGGGCCATGTCCGAGTACAGTAGCCATGCAAGATGCTTTGAACTCACACAGGGATTTCTGCCAGGAATATAACGCTACCAGACTTAACCCTCAACTCTCGTTAACTCATTCTATGAGGGAAATAGCCAAAAGAAGTTTTCAGAATAGGAAATCCAAGCTTACTCGCACCACTAGTTATCCCTGA 429 0.4382 MEQNKQKLRKAVSDVSSEIEKYYSELKLERQELGAIEEVEQAECQCCGLKEDCTSVYITEVEECYCGKWVCGLCSEAVKERVGPCPSTVAMQDALNSHRDFCQEYNATRLNPQLSLTHSMREIAKRSFQNRKSKLTRTTSYP* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1017 142 Pfam Protein of unknown function (DUF1677) 39 126 IPR012876 -
Vra5g1017 142 PANTHER OS01G0745000 PROTEIN 2 140 - -
Vra5g1017 142 PANTHER OS01G0745000 PROTEIN 2 140 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1017 Vra-Chr5 16575406 16576106 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1017 - - vun:114163704 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1017 5 16575406 16576106 Vra5g1017 5 16575406 16576106 ECH