Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1015 ATGTCTTCCGCCGAGACGGAGATGGAGCCTCTCACGTCGGGGGCGAGCAACCGCATAATTCCGCTCCTCAAGGCTCTCAGGGCTTCGCTCATCTTCGTCTACACCTTCTTCCTCTCCTTCCTCTTCTTCATCCTCCCCCGCCGCCGCCGCCTATCCTCAACGGCGGGGCCACCGTCACCCAAGAAGCATTTGAGGCGGCGCTGGCTCGTGCGCGAGGAGGAGGACACGTGCCGGCGGAGAGCCTTGGCGCAGGACTACCTTGGAATGGGTCGCGACGAAGGGTGGTGCCGGTGGAGCACTTCCATTTTCTATGGGGTTAGAAACAACGCTTTGTTTTGCCGCTCTTGGTTCCCAGTTTCCGAAGATGTCAAGGGCATTCTGATAATCATTCATGGGCTCAATGAACACAGCGGAAGATATGCGGACTTTGCGAGGCAATTAACATCATGCAACTTTGCTGTCTATGCAATGGACTGGATAGGTCATGGAGGCAGTGATGGATTGCATGGTTATGTTCCTTCTCTTGATCATGTGGTTGCAGACACAGGGGCTTTCCTAGAAAAGATCAGATCGGATAATCCTGGAATACCATGCTTTCTCTTTGGTCACTCCACTGGGGGAGCTGTGGTCTTGAAAGCTGCTTCCCATCCTCATATCGAAGTAATGGTGGAAGGAATTATATTAACCTCGCCAGCTTTAGGTGTGAAGCCAGCTCATCCAATTGTTGGTGCTGTTGCTCCAATTTTTTCTCTGGTGGCTCCAAGGCTCCAATTCAAAGGAGCAAACAAAAGGGGCATTCCAGTTTCGAGGGATCCAGCAGCGTTGTTGGCGAAGTACACAGATCCTTTGGTGTACACAGGACCTATAAGGGTACGAACTGGGCATGAAATACTACGGATATCCTCGTACTTAATGCGAAACTTCAACTCCGTGACTGTACCATTCTTTGTTCTGCACGGCACTGCTGATAAGGTAACAGATCCACTGGCCTCACAAGATCTGTATGACAAAGCAGCTTCAAAGTTCAAAGACATAAAGCTGTATGATGGTTTTCTACACGACCTTCTGTTTGAGCCTGAGCGTGAAGAGATTGCTCAGGACATTATCAACTGGATGGAAAAGAAACTATTCACTATCTGA 1140 0.5009 MSSAETEMEPLTSGASNRIIPLLKALRASLIFVYTFFLSFLFFILPRRRRLSSTAGPPSPKKHLRRRWLVREEEDTCRRRALAQDYLGMGRDEGWCRWSTSIFYGVRNNALFCRSWFPVSEDVKGILIIIHGLNEHSGRYADFARQLTSCNFAVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIRSDNPGIPCFLFGHSTGGAVVLKAASHPHIEVMVEGIILTSPALGVKPAHPIVGAVAPIFSLVAPRLQFKGANKRGIPVSRDPAALLAKYTDPLVYTGPIRVRTGHEILRISSYLMRNFNSVTVPFFVLHGTADKVTDPLASQDLYDKAASKFKDIKLYDGFLHDLLFEPEREEIAQDIINWMEKKLFTI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1015 379 Gene3D alpha/beta hydrolase 97 376 IPR029058 -
Vra5g1015 379 PANTHER PHOSPHOLIPASE-RELATED 60 376 - -
Vra5g1015 379 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 60 376 - -
Vra5g1015 379 Pfam Serine aminopeptidase, S33 122 360 IPR022742 -
Vra5g1015 379 SUPERFAMILY alpha/beta-Hydrolases 108 376 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1015 Vra-Chr5 16557669 16561319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1015 1 296 Acyl Lipid Metabolism Gene Families AT5G11650 67.763 3.44e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1015 - K01054 gmx:100816265 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1015 5 16557669 16561319 Vra5g1015 5 16557669 16561319 ECH