Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1013 ATGAGAGAGGAATCTACCCCCAAATGGGAAGGTAAAGCCATGGCTGAGCTACCCGCCACCGGTCCACAACTTACATGGGAGGTTCTGGAAGATTTCTGCAACGTACACAAGTGGCTTCCCATAGAAACATCTTACCATGTAGAGGGAGTTTCAGGTCAACCTGGTCTCGTCCGCTACTGTGCTCTCACTGTTGAAGAAGAAGGGGTTGGTGATGATGCTGAGAAGACAACAACCATGAAATGGGCCAAAGATAAGCTGCTTGAGATAGATCCTATACAACGTTGTCTGACCTACGAAATTGGTGAAAACAACTTGGGCTTTAAGTCCTATGTGGCCACAATCAAGGTGTTCCCCATGAACCAGGATGGATCCAAGATCGAGTGGAGCTTCGTCTGTGATCCTGTCCAAGGCTGGAGTTCCATGATTTGA 429 0.4802 MREESTPKWEGKAMAELPATGPQLTWEVLEDFCNVHKWLPIETSYHVEGVSGQPGLVRYCALTVEEEGVGDDAEKTTTMKWAKDKLLEIDPIQRCLTYEIGENNLGFKSYVATIKVFPMNQDGSKIEWSFVCDPVQGWSSMI* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1013 142 PANTHER - 6 139 - -
Vra5g1013 142 CDD PYR_PYL_RCAR_like 9 139 - -
Vra5g1013 142 Gene3D - 2 141 IPR023393 -
Vra5g1013 142 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 6 139 - -
Vra5g1013 142 SUPERFAMILY Bet v1-like 22 139 - -
Vra5g1013 142 Pfam Polyketide cyclase / dehydrase and lipid transport 21 139 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1013 Vra-Chr5 16546892 16547446 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1013 - - vra:106761814 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1013 5 16546892 16547446 Vra5g1013 5 16546892 16547446 ECH