Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1010 ATGAAACAGACACACTTCACTCTGCCACATGTGGCAGACATCACATGCATGGACCCCAACCGTCCCCCGCTCGTGCCGGAGAAGCTCTCCAAAACGGTGCGTTTCCTCGGTTTCTTCATACAAAACGACGTCATGAAGCGGGGGAAGAACATAGGGAAGGCGCTCAACGACGTCGTCGTCCGCCACCACCAGGCCCTCACATGCCGCCCACGTGACGCTCACGTCTCCTTCGTGTCGCCGCTGGAGTATCAGTTCAGCTGCAGCGGGAGTCCGCCGCGCCTCTCGCATGCCAGTCGGAGGAAGCTCTCTCCTCCCTCTTCAAGCCGCTCGCCGGCTCATCGCGCTGTGAGGATGTGCCGTGGCGGTGGTGACGGCATCATAGAGAGGCGCGTGAAGATCGCGGGCTCCGCCGCTTCCATGTTGAACGACGTCGTGGAGAAGGACTTCCACGTGGACGAGGCCGCGGAGGAGTTCATAGCGAGGTTCTACAGAGAGTTGAGGTTGCAGAAATGGTTGGATCACTATTGCTGA 531 0.597 MKQTHFTLPHVADITCMDPNRPPLVPEKLSKTVRFLGFFIQNDVMKRGKNIGKALNDVVVRHHQALTCRPRDAHVSFVSPLEYQFSCSGSPPRLSHASRRKLSPPSSSRSPAHRAVRMCRGGGDGIIERRVKIAGSAASMLNDVVEKDFHVDEAAEEFIARFYRELRLQKWLDHYC* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1010 176 Pfam Cotton fibre expressed protein 150 170 IPR008480 -
Vra5g1010 176 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 17 175 - -
Vra5g1010 176 MobiDBLite consensus disorder prediction 89 115 - -
Vra5g1010 176 PANTHER DUF761 DOMAIN PROTEIN 17 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1010 Vra-Chr5 16532661 16533620 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1010 - - gmx:102666753 280.796