Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1002 ATGGACGTTGAAGCAGCCAAAAACGCTCCCGAGAGAGACTCCTCGAGATTCGATGATGATGGAAGAGCCAAAAGAACCGGGAACGTGTTCACTGCTACGACGCACATAGTGACGGTGGTGGTCGGAGCAGGAGTGCTGGCTCTGGCATGGGCCATGGCCCAACTTGGATGGCTTGCTGGGATAGGTGTTATGGTCACATTTGCATGCATTTCCATGTACACTTACCATTGCATAGCTGATTGCTACAGATTTCCTGACCCAATCAGTGGCAAGAGAAACTACACTTACATGCAAGCCGTCAATTCATACCTAGGCGGAACAATGCACCTGTTTTGTGGATCGGTTCTGTACGCGAAGCTCGCTGGGGTTACAGTGGGCTACTGTATAACTAGCTCTATAAGCATGGTGGCAATAAAAAAAGCCATTTGCTTTCACAGAGAAGGCCATGATGCTTATTGCAAGTTTTCAAATAATCCCTATATGATTGGTTTTGGGGTCGTGCAACTTTTATTGTCTCAAACCCCAAATTTCCATAAGTTAACGTGGATTTCAACCGTTGCTGCCGCTACCTCTTTTGGTTATGCTTTCATTGGAAGCGGGCTTTCTCTGGCAGTGGTGGTCCAAGGTAAAGGACAGCCAACAAGTTTATTTGGAAAAAAAATAGGACCTGACCTATCTGAAGGAGAAAAAGTTTGGAAGGTTTTCAGTGCTTTGGGAAACATTGCACTTGCTTCCTCTTTTGCTACAGTTATTTATGATATAATGGACACATTGAAGTCATCTCCACCAGAAAGCGTACAGATGAAAAGGGCCAATATGTTAGGAATCATAGTAATGACAATACTTTTCATCTTATGCGGTGGACTGGGGTATGCTGCTTTCGGAAATGACACACCTGGGAACATCCTCACTGGCTTTGGATTTTATGAGCCATTCTGGTTGGTCGCTCTTGGCAATGTTTTCATTGTAATCCACATGGTGGGAGCATATCAGGTAATGGCTCAACCACTATTTCGTGTAATTGAGATGGGAGCTAATATGGCTTGGCCTCATTCAGATTTCATAAACAAGGGCTACCCAATCAAAATGGGGTTCTTGTCATGTGAAGTCAACTTTTTTAGGCTTGTTTGGAGGACAGCATATGTGATAATAGCCACAGTTCTTGCCATGGCCATGCCATTTTTCAATGAGTTTCTTGGCTTGCTTGGAGCATTTGGGTTCTGGCCTCTCATTGTTTTCTTCCCTATACAAATGCACATTGCACAGAAACAGATCAAAACACGATCATTGAAGTGGTTTATGCTTCAATTATTGAGCCTTATGTGCTTCCTAGTTACAGTTGCTGCTGCAGTTGGATCCATTCGTGGAATTTGCAAGAACATAAACAAATACAAACTTTTCATGTATAAACAATAA 1416 0.4322 MDVEAAKNAPERDSSRFDDDGRAKRTGNVFTATTHIVTVVVGAGVLALAWAMAQLGWLAGIGVMVTFACISMYTYHCIADCYRFPDPISGKRNYTYMQAVNSYLGGTMHLFCGSVLYAKLAGVTVGYCITSSISMVAIKKAICFHREGHDAYCKFSNNPYMIGFGVVQLLLSQTPNFHKLTWISTVAAATSFGYAFIGSGLSLAVVVQGKGQPTSLFGKKIGPDLSEGEKVWKVFSALGNIALASSFATVIYDIMDTLKSSPPESVQMKRANMLGIIVMTILFILCGGLGYAAFGNDTPGNILTGFGFYEPFWLVALGNVFIVIHMVGAYQVMAQPLFRVIEMGANMAWPHSDFINKGYPIKMGFLSCEVNFFRLVWRTAYVIIATVLAMAMPFFNEFLGLLGAFGFWPLIVFFPIQMHIAQKQIKTRSLKWFMLQLLSLMCFLVTVAAAVGSIRGICKNINKYKLFMYKQ* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1002 471 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 2 466 - -
Vra5g1002 471 PANTHER OS05G0424000 PROTEIN-RELATED 2 466 - -
Vra5g1002 471 MobiDBLite consensus disorder prediction 1 20 - -
Vra5g1002 471 Pfam Transmembrane amino acid transporter protein 26 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1002 Vra-Chr5 16445455 16450142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1002 18 467 Organic Solute Cotransporters AT1G10010 55.654 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1002 K24917 - gmx:100780988 794.267