Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0997 ATGTTCTCAATTGCAGCTATCAATGACACTGACTCCAAAACTAAGTGGGAGCCACTAGCTCCGACGAAAGAAGCCCAGGAATTTCATCTTTCTCAAACTTATCATGACGGGCTTCTCAAGTTACAAGCAAAAGAGTACGAGAAGTCTCGCGAACTCTTGGAATCTGTTCTTAAAGACCCTCTCATTGCTAATGCTCAGGTGAATAGCACTGCCAGTGATGGTCATCTATTGCAACTCAGATTTTTGGCATTGAAAAACCTTGCTGTTGTATTTCTTAAGCAAGGCTCCACATTTTATGAGAATGCTTTACGCTGTTATCTTCAAGCTGTGGAGATCGATTCTAAAGATTCTGTTGTTTGGAACCAGCTTGGTACATTATCATGCTCAATGGGCTCGCTGAGTATTTCACGTTGGGCATTTGAGCAAGGCCTGTTGTGTAGCCCTAATAACTGGAATTGCATGGAGAAGCTTTTGGAAGTTCTTATTGCAATTGGTGACGAGGTTGCTTGCCTTTCTGTTGCTGAATTGATTTTGAGGCACTGGCCATCACATGCTCGTGCTTTGTATGTTAAAAGTACCATTGAAGAATCAGAAATTTTACCATTTGCTCCAAGAGGCATAGACAAATTGGAGCCTAAACATGTGCGACTCAAATTTCCTAACAAGAGAAAAACTTCTAATGACAATGCAGATGAGGATGTTGTATTCAAAAAGCTTAAACAGAATAAAGAACTTCACCTGACAGAAGTTTCCTGGGTGGCTCTTGCTGATGCACTCCTGGAAATCTTATCACCACAAAGTGAGATAGATCCTGAAAAGGCGTTAACTTCTCCTGATATTAAGCTAAGCATAATCTTACCACATAGCTCAGAAGCTGTTTTGAACACTGTGGAAATGAAAGGGTCCAATGGTGATAATAGTGTTTTTGGTGATGGTAACATAGAACAATCAAGTGCTCTTAAAGAGAAAGAAGCAAACACTCAAGAAGAACAGCCACATGAAAGGAGAAGTTCTCGACTTGAAAGGCTCCGAAGTCGTAAACCAGGGAAAGAAGAATCTGATTCTTCTTATGGCAAGGACCCTACTAAGGTTGTCATTCAATATCTAGAGCCATTTATTGCAGGTGGATTGGAGGGTCAAAATACAATCGATAGAGAGACCACAAGTCTACCTTGTTTAGGAAATTCTGAATATTATAATGTTTCTGCATTTGTAAGAGAGACCTCAAACAATTATGGTGCTTATCATATGGGGCACTTGCTTTTAGAAGAGGTTGCAAAACAAGGTCTCACATACCAGGATGCTTTTGTCAAATTTCTGGAGTTGGAAAAGTTGACTAGGCATTGGGGAAAAGAGAGAACTGCTGAATGTAATGTTTTCCTTGCTGAGTTGTATTATGATTTTGGATCATGCTCTCCCATTGGTTCTAATCAGTCAGAATTTATTTCTGAGACATCTTACCATCTTTGTAAGATCATAGAATCTGTAGCTTTAGATTACCCTTTTCACTTTACTAATGCCTTGAATGAAGGTTGTTTTTTGATTGATAGCATCCAGGAGACCAGTGTAAAAACAATAGATACCTCAATGACAAGCAATTTAAATTTAGACAGCTCACTTTTGATGAAAAACAGTTCTCTTTGGGCTCGATTTTTCTGGCTAAGTGGGAGATTGTCTATTGTTGATGGCAACATGGCAAAAGCTTGTGAAGAGTTCTGTATTGCTTTGTCACTTTTGGCCAAGAGAGAAAATGTGGAAGATTCCCTCTGTTCAGTCTCCCGTCCACATTGCAAGGCTGTAAAAGAACTAAACTTTGATAGAGTTCTTGATGAAATTAATATATTGAAGGTCAACTTCTTGATGGAGAATTCTGTCATTAAGATGATGGAGCATGAAAAGTATTTGGAGTGTGTATCCCTGCTTTCTCCACTTCTATTCTGCATGCGGGATGTCTATCCTGATTCATTCCCTTTATCCATGGCAGATAAAAAGGATGAAAAGATAACTTCCACTGAGCTCATGGCTGTAGACGTTCTAATGGAAGCATGCCAAAAGACAAAGCCAATGGATGTGGAGATGTATTTCAATTGTCATTATAGGAAGCTGAAAATACTTATGACAAAGATGGGTTTAAGTACATGTATTAAATCATTCAAATCCTCTGATCAAGCACCTCATTTAAATGCATCTCCTAATTTTGATATTGATTCAAGGGAAAGTCCTAGTAAGCACTGTAGTCACTGGGTTGTGGATGAAGTGAAAGCACTTTCTGACTGTATCTCACAAGTGAAGAAAATTATTGATCAACGTGGAGATTCTGGTGGCCTTTCTGTTCCAAAAAGTAGCATTTCTCAAATGCAATCTCTGCTGTTGTTAATCATTAGCTATGTTGCCAGCATACTGGTCTTCAATAAAGCTTCAGCAGAAGAACTTTCAGATCAGGCTGAAAGCAGATGTTTTGTTGATGCAGTTGTTGTTTTCTGCAAACTCCAGCATCTTAGCCCAACCACACCAATCAAAACTCAAGTTGATTTAATTGTTGCAACACATGACCTGCTTGCTGAATATGGGCTTTGCTGTTTGGGTGAAGGTGGAAAAGGTGAAGAAGGAACATTTCTTAGATTTGCAATAAAGCATCTTTTGGCCTTGGACATGAAGCTTAAATCTAGCTTTAGCCATAAAGAATCAATGCAATGTGAAGAAGTGTCCAAAAATAGTCTTGTCAATGTGTCTCTGGAAGAATCAAAATCAGACACATTAGGCATCCAGATGGACTGGACCAAAATTGATGAAATTAATTCAGTTAAAAAGGATGTTTCTGAAGGAGTAATATCCGAAGATATATTCTCATGCAGAATTCATGATAAAGACAGCAAGGAAGTAGAGTGTGAAAATCATGGAGGTGCTGGCACTGACAGTAAGTTAATTATGGTTGAAAATTCAAGCAATCAATCAATTGAATGTGGAAATGAACTTTCTGAAGATGAACGGGAGGAACTTGAGTCTAAAATTGATTGTGCTTTAGATCAGTGCTTTTTCTGTTTATATGGATTACATCTAAGATCGGATTCATCGTATGAGGATGATCTAGTCATGCACAAAAACACAAGCCGAGGAGATTATCAAACTAAAGAACAATGTGCTGATGTTTTTAAGTATGTTCTTCCATATGCAAAGTCATCCTCTAGGACGGGACTGGTCAAACTTCGTAGAGTTTTAAGAGCTATCAGGAAACACTTTCTGCAGCCACCTGAGGACCTCTTGGAAGGAAACCCTATAGATAAGTTCCTAGATGATCCTAATCTATGTGAGGAAAAGCTCTCAGAGGAGGCTGGATCTGATGGATTTCTTGATTCTATTACGGAGAGAATGTTTCCTGATGTGGGTGGCATTGTTCAGTATAATGGAACATTGTTGAGAAGGTCTGAGCCATATTTGGAGGTCTACTGCAACTTGTATTATTTCTTAGCTCTGTCTGAGGAAATGAGTGCAACAGATAAGTGGCCTGGATTTGTTCTGACCAAGGAAGGGGAAGAATTTGTTCAACAAAATGCAAAGCTCTTCAAATATGATCTCATTTACAATCCTCTGCGCTTTGAAAGCTGGCAGAGACTTGGAAATATTTATGATGAGGAAGTAGATTTGTTGCTAAATGATGGTAGCAAGCATGTTAATGTAGTTGGCTGGAGGAAGAATGCTACTTTGTCCGAGAGAGTGGAAACAAGTAGAAGGAGGAGTAGACGTTGCCTACTAATGAGTTTAGCTTTGGCAAAGACATCTGCCCAACAGTGTGAGATACATGAGTTATTGGCGTTGGTATACTATGACAGTCTTCAAAATGTAGTCCCATTTTATGATCAGAGATCTGTTTTGCCCTTAAAGGATGCAGCGTGGATGACATTTTGTGAGAATTCAATGAAACATTTTAAGAAAGCCTTCACACTTAAGCAAGATTGGTTGCATGCCTTTTACTTGGGTAAACTCAGCGAAAAACTTGGATATTCACATGAAATTGCCATATCATATTACAATAAAGCTATTGGTTTGAACATATCAGCGGTTGATCCTGTCTATAGGATGCATGCCTCACGCTTGAAATTATTATTTAAGCATGGAAAGCAGAATTTTGAGATTTTGAAGGTTCTATCAGCAAACTCCTTTAATCAATCTGTAAAAGAAGCTGTAACAAGTATTCTTAGTGGTGTGGAAACAAACCATGAAGATTTGCTCAAATTGGATACTGTATGGTCTATGCTTTACAATGATTGCCTTTCTGCTCTTGAAATGTGTGTGGAGGGGGATCTCAAACATTTTCATAAGGCTAGATACATGCTGGCACAAGGGCTATACAAAAGAGGTGAGAGTGGTGATATAGAGAGGGCAAAGGATCATCTATCTTTCTGCTTCAAATCTTCACGCTCGTCGTTTACAATAAATATGTGGGAAATTGATAGCATGGTGAAAAAAGGAAGGCGGAAGACACCAGGTTCTGCTGGCAACAAAAAGGCCCTTGAGGTTAACTTACCAGAAAGTTCTCGAAAATTTATTACTTGCATTAGGAAGTATTTGGTGTTTTATCTCAAACTATTGGAGGAAACTGGAGATAGATGTATTCTTGAACGTTCGTATACTGCTCTTCGGGCAGATAAACGGTTTTCATTATGCATTGAAGATCTTATACCAGTGGCTATCGGTAGATATCTAAAGGCTCTGATTTCAACTATCCGCCATTCTCAGACTGCTGCCTCTGGTTCAGTGACCAGTTATGACAATGTGCTGGAGAGAATGTTTGCATTGTTCATGGAACAAGGGAGCCTATGGCCAGAGATATGCAGCTTGACTGAAATTGAAGGCTCGGATATGTCAGAGAGTATCATATATGGATATCTTCATGACTATATTGTATTATTGGAGAAAAATGGAAAACTGGAAACTCTTGAAACAATAAATGAGAAGATTCGGAAGCGTTCTAAGAATCCAAAGTTCTCTGACAGTAATTCTGCAGAAATTGGCAGGCATGCTTCTGTCGCTTGGTGCCGATCTCTTATATATAATTTGGCACAAATAACTCCATTATCATGTGCATTCTCAAATGGGATTCCGGCCCATAGTTTGATGGAAAGTGGGATGGATAATAGCCAGTTGCTCTGCATTGATTTGCAGCCAAATGAATTATGGAGTACAGCTTTTCAAGATCCAGCTCCTTTGGAAAAGATTGAAACAAGATGGAGCTCCGTTTTAGGAAAAATAAAAAATATCATCATTAACAAAGCCTCTGAGGAGAATTTGGAAACTGCAAACACTTTGCTCAGAGCATGCTATAATTTTTATCGGGAGAGTTCTTCAGTAGTGCTTACCTCCGGACTCAACTTTTATTTGATTCCATCACAATTAATTACACATATATCATTCAACCCAAGTACAGCTGGGATTGATGCACTTGATCTGAGCATACCAAGGAAGCTTCTCTTGTGGGCCTATGTTTTATCGCATGGACGATGTTCAAGTATCTCAATTGTTGTGAAGCATTGTGAAGAAATTTCGAAGTCAAAGATGAAAAGAGGAAGTGGAACGTCACCTGCGTTATCAAACACATCTCCTGCCCCTAATCTTTCAGGTAGCGGTAAAAACGGACCAATTTCTGGCGGAGGCATTGACTTTGATTCTCCGCATGTTGCAACAGTGCCTAGCGGCAATACCACTAATCTTGTGAATTCACATTCCTCCGATGACGTTCAGAGGAATCTCTTTGCTTCTCCCCAGTTGCATCAATGCACCACTAACGACGCAGAAAGAAGCAATTTGATAGCACATGAAGGAGATGCAGAGGGAGATTGA 5838 0.3924 MFSIAAINDTDSKTKWEPLAPTKEAQEFHLSQTYHDGLLKLQAKEYEKSRELLESVLKDPLIANAQVNSTASDGHLLQLRFLALKNLAVVFLKQGSTFYENALRCYLQAVEIDSKDSVVWNQLGTLSCSMGSLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHARALYVKSTIEESEILPFAPRGIDKLEPKHVRLKFPNKRKTSNDNADEDVVFKKLKQNKELHLTEVSWVALADALLEILSPQSEIDPEKALTSPDIKLSIILPHSSEAVLNTVEMKGSNGDNSVFGDGNIEQSSALKEKEANTQEEQPHERRSSRLERLRSRKPGKEESDSSYGKDPTKVVIQYLEPFIAGGLEGQNTIDRETTSLPCLGNSEYYNVSAFVRETSNNYGAYHMGHLLLEEVAKQGLTYQDAFVKFLELEKLTRHWGKERTAECNVFLAELYYDFGSCSPIGSNQSEFISETSYHLCKIIESVALDYPFHFTNALNEGCFLIDSIQETSVKTIDTSMTSNLNLDSSLLMKNSSLWARFFWLSGRLSIVDGNMAKACEEFCIALSLLAKRENVEDSLCSVSRPHCKAVKELNFDRVLDEINILKVNFLMENSVIKMMEHEKYLECVSLLSPLLFCMRDVYPDSFPLSMADKKDEKITSTELMAVDVLMEACQKTKPMDVEMYFNCHYRKLKILMTKMGLSTCIKSFKSSDQAPHLNASPNFDIDSRESPSKHCSHWVVDEVKALSDCISQVKKIIDQRGDSGGLSVPKSSISQMQSLLLLIISYVASILVFNKASAEELSDQAESRCFVDAVVVFCKLQHLSPTTPIKTQVDLIVATHDLLAEYGLCCLGEGGKGEEGTFLRFAIKHLLALDMKLKSSFSHKESMQCEEVSKNSLVNVSLEESKSDTLGIQMDWTKIDEINSVKKDVSEGVISEDIFSCRIHDKDSKEVECENHGGAGTDSKLIMVENSSNQSIECGNELSEDEREELESKIDCALDQCFFCLYGLHLRSDSSYEDDLVMHKNTSRGDYQTKEQCADVFKYVLPYAKSSSRTGLVKLRRVLRAIRKHFLQPPEDLLEGNPIDKFLDDPNLCEEKLSEEAGSDGFLDSITERMFPDVGGIVQYNGTLLRRSEPYLEVYCNLYYFLALSEEMSATDKWPGFVLTKEGEEFVQQNAKLFKYDLIYNPLRFESWQRLGNIYDEEVDLLLNDGSKHVNVVGWRKNATLSERVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQNVVPFYDQRSVLPLKDAAWMTFCENSMKHFKKAFTLKQDWLHAFYLGKLSEKLGYSHEIAISYYNKAIGLNISAVDPVYRMHASRLKLLFKHGKQNFEILKVLSANSFNQSVKEAVTSILSGVETNHEDLLKLDTVWSMLYNDCLSALEMCVEGDLKHFHKARYMLAQGLYKRGESGDIERAKDHLSFCFKSSRSSFTINMWEIDSMVKKGRRKTPGSAGNKKALEVNLPESSRKFITCIRKYLVFYLKLLEETGDRCILERSYTALRADKRFSLCIEDLIPVAIGRYLKALISTIRHSQTAASGSVTSYDNVLERMFALFMEQGSLWPEICSLTEIEGSDMSESIIYGYLHDYIVLLEKNGKLETLETINEKIRKRSKNPKFSDSNSAEIGRHASVAWCRSLIYNLAQITPLSCAFSNGIPAHSLMESGMDNSQLLCIDLQPNELWSTAFQDPAPLEKIETRWSSVLGKIKNIIINKASEENLETANTLLRACYNFYRESSSVVLTSGLNFYLIPSQLITHISFNPSTAGIDALDLSIPRKLLLWAYVLSHGRCSSISIVVKHCEEISKSKMKRGSGTSPALSNTSPAPNLSGSGKNGPISGGGIDFDSPHVATVPSGNTTNLVNSHSSDDVQRNLFASPQLHQCTTNDAERSNLIAHEGDAEGD* 1946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0997 1945 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1911 IPR033053 -
Vra5g0997 1945 MobiDBLite consensus disorder prediction 322 358 - -
Vra5g0997 1945 MobiDBLite consensus disorder prediction 1853 1877 - -
Vra5g0997 1945 Coils Coil 983 1010 - -
Vra5g0997 1945 MobiDBLite consensus disorder prediction 1851 1908 - -
Vra5g0997 1945 Gene3D Tetratricopeptide repeat domain 6 196 IPR011990 GO:0005515
Vra5g0997 1945 MobiDBLite consensus disorder prediction 1893 1908 - -
Vra5g0997 1945 SUPERFAMILY TPR-like 34 169 IPR011990 GO:0005515
Vra5g0997 1945 MobiDBLite consensus disorder prediction 319 359 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0997 K17613 - gmx:100783154 3325.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0997 5 16388753 16401294 Vra5g0997 5 16388753 16401294 ECH