Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0994 ATGACAGAAGTTGGATTTTTGAGGCTCATTGAACGAGGAACCGTGTGTGTGTGTTGGAGTGGTAAGTCTCTTTCCCCTGATGAGAAGATGGGGTTAACTCAAGTCTGTGTCTCCTGCCACAACTATAGACAAACTCTCCTATGCCTCATTCTCTTTGCTATTCTATTCACGGCCAAAGCAAGAGCAAGAGCAGTTTCTTCCAGTCTTATAGAACCTGCTGAGAAGGACATGAAAAAGCCGGAACCGATGATGATGGAAAAATCTCAGATAGGTTCTAGGCCTCCCAAGTGTGAAAGAAGATGCAGTACTTGTGAGCACTGTGAAGCAGTTCAAGTACCTGTTGCACCTCAAATTCAAACTCATAGAAGTCATTATTCACCAGCAAAAGCAACCACGCTTGTTTCTTACTCATCAAGAGGTGATGACCTTTCAAATTACAAACCAATGAGTTGGAAATGCAAGTGTGGGGATTACCTTTTCAATCCATGA 489 0.4294 MTEVGFLRLIERGTVCVCWSGKSLSPDEKMGLTQVCVSCHNYRQTLLCLILFAILFTAKARARAVSSSLIEPAEKDMKKPEPMMMEKSQIGSRPPKCERRCSTCEHCEAVQVPVAPQIQTHRSHYSPAKATTLVSYSSRGDDLSNYKPMSWKCKCGDYLFNP* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0994 162 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 30 162 IPR039455 GO:0010374
Vra5g0994 162 Pfam Epidermal patterning factor proteins 89 162 - -
Vra5g0994 162 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2 30 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0994 Vra-Chr5 16354161 16356289 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0994 - - pvu:PHAVU_009G113100g 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0994 5 16354161 16356289 Vra5g0994 5 16354161 16356289 ECH