Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0989 ATGAGGTTGAGGGAGAACGACGACGGTGGTGAGAAAGAGGAAGTGGTGGAGAATGAAGTTACCCTGGCCCAAAATCAATGGTGTCCGGTGGTCAATGCGGGGTTTTCGTCGCCCAAGAGACTGGTTGTGGTTGGTTATGCTCTTACTACTAAAAAGATAAAGAGCTTTTTACAGCCTAAGCTTGAAGGTTTAGCTAGGAACAAGGGAATACTATTCGTGGCTATTGACCATAATAGGCCCCTTTCAGATCAAGGTCCTTTTGATATTGTCTTGCATAAGTTATCAGGGAAAGAGTGGCGCCAGGTTCTTGAGGATTATAGGCAGTCACATCCTGAGGTTACAGTTTTGGACCCTCCAGATGCCATACAACATTTACGCAACCGTCAGTATATGCTTCAGGCTGTAGCAGATATGAACCTTTGTGATTCATATGGCATCGTGGGTGTTCCTCGGCAATTAGTTATCAAGAGAGAGGCGTGCGCTATTCCAGAGTTGGTCAACCAAGCTGGCTTGACTTTACCCCTTGTTGCAAAGCCACTAGTTGCCGATGGAAGTGCAAAGTCACATGAATTATCCCTTGCTTATGAGAAGTTTTCCCTTCAAAAACTTGAACCTCCTCTTGTTCTTCAGGAATTTGTCAATCATGGGGGTGTTCTCTTCAAGGTTTATATAGTTGGTGATGCTATAAAGGTAGTAAGGCGGTTTTCATTACCTGATGTTAGCAAGTGGGAACTCTCCAAAGATGCTGGGATATATAATTTTCCAAGGGTTTCGTGTGCTGCAGCTTCTGCAGATGATGCAGATCTGGATCCTACCGTCGCTGAGCTTCCTCCAAGGCCATTACTAGAGAAATTAGCTAAGGAACTTCGATGGCGATTGGGTCTTCGTCTATTCAACCTGGATATTATCCGTGAATATGGAACAAGAGATCACTTTTACGTCATCGACATAAATTACTTCCCTGGATATGGGAAAATGCCTGAGTATGAACACATATTTACTGATTTCCTGTTGAGCCTGGGGCAAGGGAAGTACAAGAAAAGATCAGGCTAA 1053 0.4416 MRLRENDDGGEKEEVVENEVTLAQNQWCPVVNAGFSSPKRLVVVGYALTTKKIKSFLQPKLEGLARNKGILFVAIDHNRPLSDQGPFDIVLHKLSGKEWRQVLEDYRQSHPEVTVLDPPDAIQHLRNRQYMLQAVADMNLCDSYGIVGVPRQLVIKREACAIPELVNQAGLTLPLVAKPLVADGSAKSHELSLAYEKFSLQKLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVSKWELSKDAGIYNFPRVSCAAASADDADLDPTVAELPPRPLLEKLAKELRWRLGLRLFNLDIIREYGTRDHFYVIDINYFPGYGKMPEYEHIFTDFLLSLGQGKYKKRSG* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0989 350 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 143 338 IPR040464 -
Vra5g0989 350 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 9 342 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vra5g0989 350 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 118 324 - -
Vra5g0989 350 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 43 122 IPR041429 -
Vra5g0989 350 PIRSF ITPK 11 350 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vra5g0989 350 Gene3D - 118 322 - -
Vra5g0989 350 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 9 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0989 Vra-Chr5 16317807 16323571 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0989 K00913 - gmx:100127409 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0989 5 16317807 16323571 Vra5g0989 5 16317807 16323571 ECH