Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0969 ATGCTCATCACTCCTAATCCTATTTTATTGAATTCCAGTTTTGTCCCCGGTTCCATTTCCAAGCGTGGTTGCGCATCTCCATCTTCTTCTCCATTCCTTTGCTCCTCTTATCCCTCAGATATGGATACTGCTGCTGGTCAAATTCTTTACCCATTGCACCGCTGTAAAACTCTTCACCTGGTTAGACATGCCCAAGGATTTCACAATGTAGAAGGTGAGAAGAACTTTGAAGCGTACAAGTCTTATGATCTTTTTGATGCAAGCCTGACCCCTCTCGGCTGGAAACAGGTTGAAAATCTGAGAGGACATGTTAAGGCTAGCGGTCTTTCGAAAACAATTGAACTAGTTATAGTTTCTCCCTTGTTAAGGACCATGCAAACAGCAGTGGGAGTTTTTGGTGGTGAAGCATGTACCGATGAGACTAGTGTACCTCCATTAATGAATGCTGGTGTGGGAGACAGTGATCGGCAAGCAATTTCCAGTCTCAATGCTCCACCATTTATAGCAGTGGAGCTTTGCCGGGAACACTTGGGGGTGCATCCTTGTGATAAGAGAAGAAGCATCACTGACTACCGACATATGTTTCCAGCTATTGATTTTTCATTGATAGAAAATGATGAAGACATTCTGTGGAAACCTGACATTAGAGAGAAGAATGAAGAAGTTGCTGCCAGGGGACTTAAATTTTTGGAATGGCTGTGGACAAGAAAAGAAAAGGAGATAGCTGTTGTTACCCACAGCGGTTTTCTGTTTCACTCCTTGAGTGCTTTTGGAAATGATTGTCATCCAACAGTGAAGAGTGAAATCTGCACACACTTTGCTAATTGTGAGCTACGTTCAATGGTTGTCGTTGATAAAGGTATGATTGGTTCAGATGAATCATCTACCAACTATTCTGGCAAAATTCCTTATGGCCTTGATCTTCCCAGTGATGTTGCTGACGAAAACCATATAGGGAACGGAAACTGA 969 0.4272 MLITPNPILLNSSFVPGSISKRGCASPSSSPFLCSSYPSDMDTAAGQILYPLHRCKTLHLVRHAQGFHNVEGEKNFEAYKSYDLFDASLTPLGWKQVENLRGHVKASGLSKTIELVIVSPLLRTMQTAVGVFGGEACTDETSVPPLMNAGVGDSDRQAISSLNAPPFIAVELCREHLGVHPCDKRRSITDYRHMFPAIDFSLIENDEDILWKPDIREKNEEVAARGLKFLEWLWTRKEKEIAVVTHSGFLFHSLSAFGNDCHPTVKSEICTHFANCELRSMVVVDKGMIGSDESSTNYSGKIPYGLDLPSDVADENHIGNGN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0969 322 SUPERFAMILY Phosphoglycerate mutase-like 56 287 IPR029033 -
Vra5g0969 322 SMART PGAM_5 57 253 IPR013078 -
Vra5g0969 322 Gene3D - 56 297 IPR029033 -
Vra5g0969 322 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 37 314 - -
Vra5g0969 322 Pfam Histidine phosphatase superfamily (branch 1) 58 131 IPR013078 -
Vra5g0969 322 CDD HP_PGM_like 57 128 IPR013078 -
Vra5g0969 322 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 37 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0969 Vra-Chr5 16005339 16012110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0969 - - gmx:548047 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0969 5 16005339 16012110 Vra5g0969 5 16005339 16012110 ECH