Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0964 ATGGCAACGGTGTCCGATCAGACCACTAGTATGTGCACTCACTGTGATCGGGCTATCCCTTCTGCAAATATTGATTTGCATTATGCTCATTGCTCTCGGAACCTTGAAAGATGCAAAATTTGTTGCGATATGGTTCCGAAAACACTTGCCGAGGAGCACTATTTGAACACACATGCCCCGGTTGCCTGTTCGCTGTGCAGTGAAACTATGGAACGTGATATTTTAGATATTCATAGAGATGAAAATTGTCCTAGAAGGATGGTCACCTGTGAGTTCTGTGAGTTTCCCTTGCCAGCCATTGATCTGGTTGAGCATCAGGAAGTATGCGGGAATCGAACAGAACTTTGTCACCTTTGTAACAAGTATGTTAGACTGCGTGAAAGATACAACCATGAAGATAGTTGCAATAGAATTCAAGAGAATTCTTCAAGGCCTTCAAGGTACGTGAGACCAGTTGAAAGAGACGAAGGTCCTCGAAGAAGGCCGCAGAATGATTTCCCAAGAAAGCGTGTGTTTTTCACAATAGCAATCACCGGTATTGCTGTTATTCTCGGGTCTATTTTTTTCCAGAGAAAGACAGATCTCAGCAATGTGCAATAA 600 0.4317 MATVSDQTTSMCTHCDRAIPSANIDLHYAHCSRNLERCKICCDMVPKTLAEEHYLNTHAPVACSLCSETMERDILDIHRDENCPRRMVTCEFCEFPLPAIDLVEHQEVCGNRTELCHLCNKYVRLRERYNHEDSCNRIQENSSRPSRYVRPVERDEGPRRRPQNDFPRKRVFFTIAITGIAVILGSIFFQRKTDLSNVQ* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0964 199 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 198 - -
Vra5g0964 199 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 1 198 - -
Vra5g0964 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 111 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0964 Vra-Chr5 15965255 15969592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0964 - - gmx:100306673 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0964 5 15965255 15969592 Vra5g0964 5 15965255 15969592 ECH