Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0959 ATGAGTGGTTGTGGGAGTGAGAGCGGGAAAATTGAAACAAGTGAAGGCGATGCCAATGACTCCGTGACTTTCGGAGATATGATATTTATCAAGCTTCGTGGTAACTCATGGTGGCCTGCGCAGGTAGTTGATGAAAATAGTGTTAACAAGAGTGTTAAGCCAAGCAAACGGAGCAAGCGATCGCCTGGGGACATCCTTGTTAGGCATTATGGAAGTTATATATACTCATACGTAGATCCTATTAAATGCCGTGCTGAGTTTAAGAAGATAATTGAGAATAACGATGGTTCTCTCAGGAAAATACTTTTGCAAACTCTTGAGCAGGACCTTCCTAGTACGAAATCCAGTAGGTCAAAGGGGTCTTCAATAAAGCCTAAAGGTTCATCGAGCAAAGATTCTGCTGGCAAGAAAAAATCCAATGGACAAGATAAGGAGCAGAACAAAATTAAGCACAAAAGGCAAAAAGATATGTCAAACGATGATAACGCTGGCCAAAGTCATGAAACAAGCTCCTTAGGAAAGTCCCCAGAGTTGAGTTCCAGGAGAATTAGAGTGATGGAAAACCTTGGTCTTATTGCTCCAGCTGGGTCACCATTCCAAAAAGGTGCTCTTAAAGATAACCAAGCCTCGTGA 633 0.4234 MSGCGSESGKIETSEGDANDSVTFGDMIFIKLRGNSWWPAQVVDENSVNKSVKPSKRSKRSPGDILVRHYGSYIYSYVDPIKCRAEFKKIIENNDGSLRKILLQTLEQDLPSTKSSRSKGSSIKPKGSSSKDSAGKKKSNGQDKEQNKIKHKRQKDMSNDDNAGQSHETSSLGKSPELSSRRIRVMENLGLIAPAGSPFQKGALKDNQAS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0959 210 MobiDBLite consensus disorder prediction 163 177 - -
Vra5g0959 210 MobiDBLite consensus disorder prediction 109 129 - -
Vra5g0959 210 Pfam PWWP domain 25 80 IPR000313 -
Vra5g0959 210 Gene3D - 15 119 - -
Vra5g0959 210 MobiDBLite consensus disorder prediction 130 162 - -
Vra5g0959 210 MobiDBLite consensus disorder prediction 109 181 - -
Vra5g0959 210 PANTHER OS08G0477800 PROTEIN 9 158 - -
Vra5g0959 210 PANTHER OS08G0477800 PROTEIN 128 203 - -
Vra5g0959 210 SUPERFAMILY Tudor/PWWP/MBT 22 83 - -
Vra5g0959 210 ProSiteProfiles PWWP domain profile. 24 89 IPR000313 -
Vra5g0959 210 PANTHER ALDOLASE-RELATED 9 158 - -
Vra5g0959 210 PANTHER ALDOLASE-RELATED 128 203 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0959 - - gmx:100815242 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0959 5 15913220 15924377 Vra5g0959 5 15913220 15924377 ECH