Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0952 ATGGGAATTGGATGGACATCTTGGAAGAAAAGATGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGGAGTGATCCAAATGCAATCCCTCAAAAGGGAAATGAAGTTAATTTGACCCTTGGAGGCATTGACCTCAACAATTCAGGCAGTGTTGTTATCAAAGCAGATAAGAAACTTTTGACTGTGCAATTTCCTGATGTTCATGATGGAAGAGCATTCACACTTAAGGCTGAAACCATGGAGGATTTATACGAGTGGAAGACTGCACTTGAGAATGCTTTAGCACTGGCACCTAGTGCTACCAATGGAACGGAGCAAAATGTGAAGGATAGAGAACCAGCTAAATCTACTGTTATTGGTCGACCAATTTTACTTGCTTTGGAGGATGTTGATGGAACGCCATCATTCTTGGAGAAAGCCCTAACATTCATAGAAGAGCATGGAGCAAATGTGGAAGGAATCTTGCGACAAGCAGCTGATGTTGATGAGGTTGAACGTCGAGTTCGGGAATATGAACAAGGAAGAGTTGAATTTTCTCCAGATGAGGATGCACATGTTATTGGAGACTGTATTAAGCATGTACTTCGCGAATTACCATCGTCTCCAGTCCCCGCATCTTGTTGCAAAGCACTGTTAGAATCTTGTCGAACTGAGCGTGGTAGTAGGGTTGCTGCTATGCGTGAAGCAATAAACGACACTTTCCCAGAACCAAATCGCCGCTTATTGCAAAGAATACTCATGATGATGCAAAGTGTGGCTTCACGCAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCGCCTTTACTTCTTCGACCCCTTTTGGCCGGAGAATGTGAAATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTATTCAACTTTTACAAGCTGCTGCTGCAGCAAACCATGCTCAAGCAATTTGTATAACCTTATTAGAAGAATATAACAACATATTTGGGGGAGGTTCCATGTCCCCTGACATATACACTGACTCAGATGAAGTGAGTGGATCTGAGAGTGAGGACGAGGCAACTGATGATGAGGTGTCTTATGATGATGATGAAGAGTATGATGATGAAGAAGATGATGAAGAATCAGTACATGATAGTGAAGGAGAAGATGATCTTGTCAGTGAATCGTACAGTGGAACTGAAGATTCAGAGGCCGATTATGAGGAGCATGACCATGCTAGTTCAAGTTCGAAATCCTCAGTTTTGACTGAAAAATCTAAAGCCACTCGAAAGTTATCATCAAAGTCACTAGAAGTCTCACCGCCTCAACAAAAAGATATCAAAAGCTCTGAACATCTCACGAGTCCAAAGAAGACTGACTACGGTGATCGGTCCAATAAGCGTGTTGATAAAGTTGGAAATGCTATTGATGAAACTGCATTGCAAAATTTAAATTCTCCTGGCCCTGCTATAAAGAAATCCAACACCATGTCCAATGGCCCAGCACCTCGTCATCGCACCACATTGGGGCGCACCTCAGCAAGGAAGAATCTTTCCATGGAATCCATTGATATTTCTATAGAAGACGAGGATGAAATTGAAAGGCTTGAAGCTGCCAGGTCAGAATTACAAACTCAAATTGCAGAGCAGGTGAAGGCAAATGCAGAGCTGCAATCTCAAGTGGATAATCAAAAGAAAGCCTTGGACGAGCGTCGTCTTTCTCTTGAGCAGGAAGTTGCTAGACTACATGAACAGTTGAACAAGGAAAAGAATTCTCGGGCAGCTCTCGAGAACAAAACAGAGCTTGAGGAATTAGCACTGGTAGAAGCAGATCTTGCCAGTTTAGAGTGGAAGGTTGGGGAACTTGTGGCTAGGCTTAATGCACAACTTGAAAGGAATCTTGGGACTACTTCTGAGTTCTCGAATCAACCACGACAGATGTCAAATCAGGAAAGAAGATTCAGAAAATACAAGGCAGATGCTGAAGCAGCCGCTGCCTCAACACAATCTGATAGATCAATAAGTAAGGGTACGGTAATGGCCCAACAACAGGACACTCATACTGTCGGAGCAGAAAGTGATACTGAACGAAAGCCAGAATCAACACCTTTACCAAACAAACACCCACCAAGTAGCTCCAAGCGATCAAGTTCAAAGGGCGAGGGAGGAAATTCCACTCCTTCTGCACTCACAAAACTGACAACCAGACTGAACCTTTTGAAGGTGGCCCGAAATCAGATTGCAAATGAACTCCAAAACTTGGATAAAGGGCGAGACTCAAGTCGCTCGTCACACAATGCGGAAAAAGGAAAAGGGTCTGAGCGTCATCAAACACTGCCATCACCCAAAACATATGGAGGGTCTGAAGCTCACTCTGTGCCAAACCAAGAAAAAGGTAAGGGGTCAGAATCATCAGACAAAGGATCAAGCAAAGGAAAATTATCTCAACACAGTTCATCAGACAAACTTAAAAAATCAGACAGTCATCCAGCCCACCACACTGATGGATGGAATCAACAAGCAAAACACTTGGAAAGAGGAAGGTCAGATGGCCATCAGATATATAATGTGGACAAAGGCCGGTGA 2556 0.4323 MGIGWTSWKKRWFILTQTSLVFFRSDPNAIPQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETMEDLYEWKTALENALALAPSATNGTEQNVKDREPAKSTVIGRPILLALEDVDGTPSFLEKALTFIEEHGANVEGILRQAADVDEVERRVREYEQGRVEFSPDEDAHVIGDCIKHVLRELPSSPVPASCCKALLESCRTERGSRVAAMREAINDTFPEPNRRLLQRILMMMQSVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSIQLLQAAAAANHAQAICITLLEEYNNIFGGGSMSPDIYTDSDEVSGSESEDEATDDEVSYDDDEEYDDEEDDEESVHDSEGEDDLVSESYSGTEDSEADYEEHDHASSSSKSSVLTEKSKATRKLSSKSLEVSPPQQKDIKSSEHLTSPKKTDYGDRSNKRVDKVGNAIDETALQNLNSPGPAIKKSNTMSNGPAPRHRTTLGRTSARKNLSMESIDISIEDEDEIERLEAARSELQTQIAEQVKANAELQSQVDNQKKALDERRLSLEQEVARLHEQLNKEKNSRAALENKTELEELALVEADLASLEWKVGELVARLNAQLERNLGTTSEFSNQPRQMSNQERRFRKYKADAEAAAASTQSDRSISKGTVMAQQQDTHTVGAESDTERKPESTPLPNKHPPSSSKRSSSKGEGGNSTPSALTKLTTRLNLLKVARNQIANELQNLDKGRDSSRSSHNAEKGKGSERHQTLPSPKTYGGSEAHSVPNQEKGKGSESSDKGSSKGKLSQHSSSDKLKKSDSHPAHHTDGWNQQAKHLERGRSDGHQIYNVDKGR* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0952 851 ProSiteProfiles PH domain profile. 1 96 IPR001849 -
Vra5g0952 851 MobiDBLite consensus disorder prediction 741 851 - -
Vra5g0952 851 CDD RhoGAP 135 273 - -
Vra5g0952 851 Gene3D Rho GTPase activation protein 104 326 IPR008936 GO:0007165
Vra5g0952 851 ProSiteProfiles Rho GTPase-activating proteins domain profile. 126 325 IPR000198 GO:0007165
Vra5g0952 851 SMART PH_update 1 98 IPR001849 -
Vra5g0952 851 Pfam PH domain 7 95 IPR001849 -
Vra5g0952 851 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 2 750 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 440 464 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 423 439 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 627 720 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 767 789 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 329 513 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 697 720 - -
Vra5g0952 851 Gene3D - 1 103 IPR011993 -
Vra5g0952 851 MobiDBLite consensus disorder prediction 340 392 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 468 510 - -
Vra5g0952 851 SMART RhoGAP_3 132 322 IPR000198 GO:0007165
Vra5g0952 851 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 2 750 - -
Vra5g0952 851 SUPERFAMILY PH domain-like 5 106 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 656 679 - -
Vra5g0952 851 SUPERFAMILY GTPase activation domain, GAP 134 326 IPR008936 GO:0007165
Vra5g0952 851 Coils Coil 516 589 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 745 766 - -
Vra5g0952 851 MobiDBLite consensus disorder prediction 807 851 - -
Vra5g0952 851 Pfam RhoGAP domain 135 278 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0952 Vra-Chr5 15836810 15846058 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0952 - - vra:106760371 1481.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0952 5 15836810 15846058 Vra5g0952 5 15836810 15846058 ECH