Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0951 ATGGATCTCAAAGCTTCGGCGGATCCGGACCCGGACCCGCTTCGCGTGAAGAGGAAGACCCTTGAGGCTGTGCTCTTGCAGTGTCAGAGAGCTCTTGAATTGATCAACGCTGCTTCTCCTTCATCTTCTGCTTCTTCTGAAGTCGAAGAAGAGGATTGTGTGGCTGACAGCGAAGCTGAGGCCATTGCGTCTACCGATCCTCTTGCCGACCAGTTACGTAATATGCTCAAATCAAGAGTTGAATGCCCTGCCTTTCTTCAAAAGTTGGAGTGTGCTCAGGCATCAGTTTCGCAGAATATATATGAAGAAGGTAATTCTTGGGATTTGATTGGTGAAAATGATCTCTGGGAAGGCCAACGTGATGACTTAGACCAAGAAGATTATGTACTTGTTAGACAAGAGGATGTAGTCGAGGGCATCGCATGCTTCATGGCTGCATATTTGCTATCAATTAAGCAGACTAAGGATTTAACACCTATTCAACTCCAGGACGGATATATCAAAACCCTGTTATTATTACGGCCGCAACTAAAGCATTCTGGACTTCTTGCCATGTTATATCGAAGCTTCTCTGATTTGCCCTTGCTGCTTGGAGCAAAGTTGTGA 606 0.4571 MDLKASADPDPDPLRVKRKTLEAVLLQCQRALELINAASPSSSASSEVEEEDCVADSEAEAIASTDPLADQLRNMLKSRVECPAFLQKLECAQASVSQNIYEEGNSWDLIGENDLWEGQRDDLDQEDYVLVRQEDVVEGIACFMAAYLLSIKQTKDLTPIQLQDGYIKTLLLLRPQLKHSGLLAMLYRSFSDLPLLLGAKL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0951 201 PANTHER RING FINGER PROTEIN 6 170 - -
Vra5g0951 201 PANTHER RING FINGER PROTEIN 6 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0951 Vra-Chr5 15829946 15833446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0951 - - gmx:100790753 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0951 5 15829946 15833446 Vra5g0951 5 15829946 15833446 ECH