Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0947 ATGGCTTCCACACTCTGCTCCTCTTCTACTTGTGCACCAACACAATCGTCCCTTTTCTCCTCCTTCACGCTACGACGTCGTTTGCCCCTCGTCGGAGCCTTTTGCATGCTTAGTTTGGGACTCTCTAATCTCTACACCCCCTTCTATTCCTCTGCCCTCAAAACGGGGTGCGTTCTGTCTCTCTTGCGATCAAAATTGGGTGTCCGCAGCCACTCCGCCATCAGAATGGAAGCAAATAGCACTACTGTCCCCAGCATTGTTGTCTATGTCACTGTTCCCAACAAAGACGCAGGTAAGAAATTGGCTGAAAGTATTGTCACGGAGAAGCTTGCAGCTTGTGTGAACAGGGTACCGGGTATTGAATCAGTGTACCAGTGGGAGGGAAAGATCCAAACTGATTCCGAGGAGCTTCTTATAATCAAGACTAGGCAATCCCTTCTAGAGGCACTGACAGAGCATGTCAAAGCAAATCATGAATACGATGTGCCAGAGGTGATCTCCTTGCCCATCACTGGGGGCAATCTTAAATATTTAGAGTGGATTAAAGAGAGCACAAGGGAGTGA 564 0.484 MASTLCSSSTCAPTQSSLFSSFTLRRRLPLVGAFCMLSLGLSNLYTPFYSSALKTGCVLSLLRSKLGVRSHSAIRMEANSTTVPSIVVYVTVPNKDAGKKLAESIVTEKLAACVNRVPGIESVYQWEGKIQTDSEELLIIKTRQSLLEALTEHVKANHEYDVPEVISLPITGGNLKYLEWIKESTRE* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0947 187 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 18 186 IPR004323 GO:0010038
Vra5g0947 187 SUPERFAMILY GlnB-like 85 186 IPR011322 -
Vra5g0947 187 Pfam CutA1 divalent ion tolerance protein 86 183 IPR004323 GO:0010038
Vra5g0947 187 Gene3D - 76 187 IPR015867 -
Vra5g0947 187 PANTHER PROTEIN CUTA CHLOROPLASTIC 18 186 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0947 K03926 - gmx:100792337 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0947 5 15791173 15794587 Vra5g0947 5 15791173 15794587 ECH