Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0940 ATGAGTGCCGACGCCCCCACCCAAACCCAAGCCTCCGCCACCAAACCTCACGAAACCCAAACCGTCGAAACAAAACACGAAGAGTCCCAATCTGCATCTCAGCCTCACACCGCCGATTATGCTCCATACCCTAAACTGGACCCAGACGACGTCGTGCCACCTCCTCTTCAACAGCAAGAAGCACCCCTCAATACTGAATCTCGTGCCCCAATCTCCGGCGATGCTGCCACTACCATGCCCAAAGACTCCAATCCCTATGTCACTCCTGCTCCCGTTGCCGCTTCCTCTACCAAGACCACTTTAGATTCCGTGAAAGACGTTCTCGGCAAATGGGGCAAGAAAGCCGCCGAGGCCACCAAAAAGGCGGAGGATCTCGCCGGTAACATGTGGCAGCACTTGAAAACGGGTCCAAGTTTTGCGGATGCAGCTGTGGGGAGGATTGCTCAGGGAACTAAAGTTCTTGCGGAAGGAGGGTATGAGAAGATCTTTAGGCAAACTTTTGAGACAGTTCCAGAGGAGCAGCTTCTGAAAACGTATGCATGCTACTTGTCTACTTCAGCTGGACCTGTGATGGGAGTCTTGTATTTGTCAACAGCGAAGCTGGCGTTTTGTAGTGATAACCCACTTTCTTACCAAATGGGTGACCAGACTCAATGGAGCTATTATAAGGTGGTCATTCCATTGCATCAACTGAGAGCAGTGAACGCTTCAACAAGCAGAACCAACTCGTCTGAAAAATATATTCAGATTATCTCTGTTGACAACCATGAATTTTGGTTTATGGGGTTTGTGCATTATGACAGCGCTGTTAAAAATATTCAAGGAGCATTGCAGCCTCATTGA 843 0.4935 MSADAPTQTQASATKPHETQTVETKHEESQSASQPHTADYAPYPKLDPDDVVPPPLQQQEAPLNTESRAPISGDAATTMPKDSNPYVTPAPVAASSTKTTLDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQMGDQTQWSYYKVVIPLHQLRAVNASTSRTNSSEKYIQIISVDNHEFWFMGFVHYDSAVKNIQGALQPH* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0940 280 Pfam GRAM domain 162 278 IPR004182 -
Vra5g0940 280 PANTHER GEM-LIKE PROTEIN 1 26 279 - -
Vra5g0940 280 MobiDBLite consensus disorder prediction 58 96 - -
Vra5g0940 280 MobiDBLite consensus disorder prediction 1 96 - -
Vra5g0940 280 Gene3D - 159 278 IPR011993 -
Vra5g0940 280 SMART gram2001c 161 238 IPR004182 -
Vra5g0940 280 PANTHER GEM-LIKE PROTEIN 2 26 279 IPR037848 -
Vra5g0940 280 CDD PH-GRAM_GEM 172 278 - -
Vra5g0940 280 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0940 Vra-Chr5 15682867 15686789 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0940 - - gmx:100775667 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0940 5 15682867 15686789 Vra5g0940 5 15682867 15686789 ECH