Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0922 ATGCCCCCTAACGACGATTTTCAAGGCGTTTCAAATTGCTATGTGTTTAAAAGCCGATTGCAAGAGTATGCCCAGAAGGCGGGGCTGCCCACTCCTGTATATGAAACTATCAAGGAAGGGCCTTCCCATGAACCTTCTTTCAGGTCAACAGTGATAGTGAATGATGTTCGGTATGATTCTTTGCCTGGATTTTCCAATCGGAAGGCAGCAGAGCAGTCCGCTGCCGAAGTTGCTTTGGTGGAGTTGGCCAAATCTAATGTTGTTAATCATTCTATCACTCAACCTGTTCATGAAACAGGATTATGCAAAAATTTACTTCAGGAATATGCCCAGAAAATGAACTATGCAATGCCTATGTATCAATGCAAAAAGGATGAAACACCTAGTCGAGCATCAGTATTTTCATGTACGGTGGACATTGGAGGTATACTCTATATTGGGGGAGCAGCAAAAACCAAGAAGGAAGCAGAGATTAAAGCTGCCAGAACTGCTTTATTAGCTATCCAGTCAAGTGCATCTCATGCTTCCCAAAACCAGGTTGGCCATCCACAGTTGACAGTCCTTCCATGCAGGAAAAGGGCAGCAGAATCTGTTTCGATAGCCGATGAGAATTCAAATCCCCCAAAGCCTAAGAAAGCACGGTTTAAAAGGAAATCTTCTAAGAGGAAAAATCCTAGAGATAAGTTAGGCCCAATTCATACTGAAAACTTGGGTATTGGAACAAATATTAATCATGAAGTAGAAACACAAGGAAGTGTTAATGGTGAATCAGGCGTGCAAGAAACGAAATCTGAAAAATTCACTTCAGAAGTCATGAAGAATTTAGAGGATGGAATATCATTTAATTATCCTGATAAAGAAGCATATGCTGTGGAGGGTTCTTTTGTTTTTGAAAATGGAAAGTCAGCAGAATTATATTCCAAGGAGAACAATCTTGGGACTGTTGTTACAGATCTCTCTTCCGTGTCTAATGGTGACATATTGGAAACAAGTGTGGAGATGAACAAACAGCTATACAACGGAGAAATGGTTTCAGACCATTGTGTTGTGGGGGGTTGA 1059 0.4108 MPPNDDFQGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGFSNRKAAEQSAAEVALVELAKSNVVNHSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKKDETPSRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASHASQNQVGHPQLTVLPCRKRAAESVSIADENSNPPKPKKARFKRKSSKRKNPRDKLGPIHTENLGIGTNINHEVETQGSVNGESGVQETKSEKFTSEVMKNLEDGISFNYPDKEAYAVEGSFVFENGKSAELYSKENNLGTVVTDLSSVSNGDILETSVEMNKQLYNGEMVSDHCVVGG* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0922 352 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 1 295 IPR031147 GO:0003725
Vra5g0922 352 SUPERFAMILY dsRNA-binding domain-like 103 170 - -
Vra5g0922 352 Gene3D - 16 97 - -
Vra5g0922 352 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 101 170 IPR014720 -
Vra5g0922 352 MobiDBLite consensus disorder prediction 198 243 - -
Vra5g0922 352 Pfam Double-stranded RNA binding motif 17 79 IPR014720 -
Vra5g0922 352 Pfam Double-stranded RNA binding motif 103 166 IPR014720 -
Vra5g0922 352 PANTHER RIBONUCLEASE III 1 295 IPR011907 GO:0003723|GO:0004525|GO:0006364
Vra5g0922 352 Gene3D - 98 170 - -
Vra5g0922 352 SUPERFAMILY dsRNA-binding domain-like 15 82 - -
Vra5g0922 352 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 15 84 IPR014720 -
Vra5g0922 352 CDD DSRM_AtDRB-like_rpt1 15 83 IPR044450 GO:0003725
Vra5g0922 352 SMART DRBM_3 102 169 IPR014720 -
Vra5g0922 352 SMART DRBM_3 16 83 IPR014720 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0922 - - gmx:100782651 575.474