Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0880 ATGACGCAGCAAAAGCGGTTCAAAAATTTGACCCAAAACCTCAAAGATAAAGCCTCCGTCATCGCCGCGGTCCTATCCCCGAAGCGCCACGTCTCCTCCGTCCGGGTTCACGTTCTCCGCGCCACCACGCACGCCCTCACGGCTCCTCCCTCCGAAGAAACCATCGCCGCCGTACTCACGGTGGGGCAGGGCTCCAACCGCAACCCGCGAGCCTGCATCGACGCGCTCATGGACCGCCTGCACCACACGCGCAGCGCCACGGTGGCGCTCAAGTGCCTCTTCACTCTACACAACGTCGTCGTAAAGGGACCCTTCACGTTGAAGGACCAACTCTCGTGTTACCCTTCCTACGGCGGCCACAACTTTCTTAACCTCTCGAAATTTCGCGACGAGTCGGACGTGGAATCGGTAGAGCTGAGTTCGTGGGTGCGGTGGTACGCCGGCGTGCTGGAACAGAGCCTCACGGTTTCCAGAGTCTTGGGGTATTACCTCAACGCCTCTCGCGAATCCCAAGAAAGCAAAAAGATTATCCTTTCGAACGCGTCGAATGCGGATTTGTTATACAAGTTGGAGGCGCTCGTGGGTTTCGTCGAACAAATAAGCCATGTGCCCGATTCGCTGCACCTGCAGAGGAACGAGTTGGTTTACGAGGTGGTACGGCTGGTGGGCGAGGATTATAGGAGCGTGCAGGTTGAGATTTTGTTGCGCGTGGAAGAACTCGGGGAGAGAATGGATGATCTTGATGTGGGTGAGTTGAACGAGTTGGTGGGATATTTAGGGAGATTGGAGGCGACTCAGGAGAAGTTGGTTCTTTTGTTTGTGAATAGGAAAAGGAACAATGGATTCTGGGATTTGGTTCAGCAGACTAAGATCAAGGGAATGGCCAAAAAGAGGGAAATTGAAGGGAAGTGGCTCACGGTGGTCGTTAACGCCAGCGCCGCCGAATTGGCTCGCTCCACCAACCCGTTTCTTGACCCCGGGCAACCCAGTCCGGTCCCACGGATAGATTTTGCAACGGTAAGGTGA 1026 0.5536 MTQQKRFKNLTQNLKDKASVIAAVLSPKRHVSSVRVHVLRATTHALTAPPSEETIAAVLTVGQGSNRNPRACIDALMDRLHHTRSATVALKCLFTLHNVVVKGPFTLKDQLSCYPSYGGHNFLNLSKFRDESDVESVELSSWVRWYAGVLEQSLTVSRVLGYYLNASRESQESKKIILSNASNADLLYKLEALVGFVEQISHVPDSLHLQRNELVYEVVRLVGEDYRSVQVEILLRVEELGERMDDLDVGELNELVGYLGRLEATQEKLVLLFVNRKRNNGFWDLVQQTKIKGMAKKREIEGKWLTVVVNASAAELARSTNPFLDPGQPSPVPRIDFATVR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0880 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 332 - -
Vra5g0880 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 332 IPR045192 GO:0048268|GO:0072583
Vra5g0880 341 SMART enth_2 32 164 IPR013809 -
Vra5g0880 341 Gene3D - 4 163 IPR008942 -
Vra5g0880 341 CDD ANTH_N_AP180_plant 35 157 - -
Vra5g0880 341 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Vra5g0880 341 Pfam ANTH domain 35 202 IPR011417 GO:0005543
Vra5g0880 341 SUPERFAMILY ENTH/VHS domain 34 161 IPR008942 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0880 - - gmx:100788852 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0880 5 14785257 14786620 Vra5g0880 5 14785257 14786620 ECH