Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0867 ATGAAGAAGACGAAGAACCCCACACTCCGAGAGAGAAGAGGACCAATGCAGCAGAAGCGTCGGACGGTTCCACTGGGTATGCTCAGAAGGTTTCTCGCCGCCTCAATATTCTCCATAGTTGTCACTTCTTTCTTCTTTGTTCACGTTCACGTTTCTCCTTCGCCCACTCATCACAACTTCAGTGACAAGATCCCCTCGTTTTATGACCCGCTTAGCTGGACTCGAGAACTCGTTCCGCCCTATCTATTCAAGACTCCGTTCTCTGTTCCCAAGTTGAAGGATTCAAGAAAGGAGTCAGACTACGAGAAATTGTGGAAGCCTCCACCAAATCATGGGTTTATACCCTGCACGAAGCCTACTCCTAATTACACAACTCCGACAAGGTCACGGGGTTACCTTTCAGTTCATACAAATGGAGGGCTAAACCAAATGCGTTCTGGGATATGTGACATGGTAGCCATAGCTCGTATCATAAATGCTACTCTTGTGCTTCCAGAACTTGATAAAAAATCATTTTGGCATGATACTAGCAATTTCTCTGATATCTTCGATGATGAGTGGTTTATTAGTTCTCTAGCTAATGATATAAAGATCATTAAGAAGCTTCCGAAGGAACTGGTTAAAGCAACCAAAATCGTCATGCAATTCAAAAGTTGGTCTGGTATGGATTACTATGAGAATGAGATTGCTGGCTTGTGGGATAGTTTCAATATAATTCGAGCTTCAAAATCTGATTCTCGGTTAGCAAATAACAATCTACCTCCAGATATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTTCGTTTCTCTCCTCGTATTGAAAAAATGGGAAAAACATTGGTGGATAGGATGAGGTCATTCGGTCCCTATATTGCATTGCATTTACGTTATGAGAAGGACATGCTTGCATTTAGTGGGTGCACACATGAATTATCTAAAGTTGAATCTCAAGAGCTACGGTTTATCAGAGAGAATACTACTTATTGGAAAAGAAAATACATTAATCCCATAGAAGAGAGGTCCAAAGGGTTTTGCCCCTTAACTCCAAAGGAAGTTGGAATCTTTCTCACTGCTCTTGGATACCCATCAAAGACTCCAATATATATTGCTGCTGGGGAGATATATGGGGGTGAGTTCCATATGGCTGACCTGCGATCCCGCTATCCACTGTTAATGAGCAAGGAAAAGTTGGTATCCATGGAGGAGCTTGAACCCTTTTCTAGTCATGGGTCTCAAATGGCTGCTCTGGACTATATTGTATCAGTTGAAAGCGATGTGTTTGTACATTCTTACCCTGGAAACATGGCGAAGGCCGTTGAAGGCCATCGTCGATTTCTCGGGAGAGGAAGAACAATATCTCCTGACAGGAAAGCGCTTGTTCGTTTGTTTGATAAACTGGAAAATGGATCAATGACCGAGGGGAAAACACTGTCTAATAAAATTATCGATCTCCACAGAAGACGGCTTGGCTTCATCAGAAAGAGAAAAGGACCCGTTTCTGGAACAAAGGGCTTGGACAGGTTTCGTTCAGAAGAAACATTTTATGCAAACCCTTTACCAGGTTGTTTATGTCGGACAGAATCACTCTCTGTAAACGCTTCTCGGTATAGGTAG 1620 0.4284 MKKTKNPTLRERRGPMQQKRRTVPLGMLRRFLAASIFSIVVTSFFFVHVHVSPSPTHHNFSDKIPSFYDPLSWTRELVPPYLFKTPFSVPKLKDSRKESDYEKLWKPPPNHGFIPCTKPTPNYTTPTRSRGYLSVHTNGGLNQMRSGICDMVAIARIINATLVLPELDKKSFWHDTSNFSDIFDDEWFISSLANDIKIIKKLPKELVKATKIVMQFKSWSGMDYYENEIAGLWDSFNIIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEKMGKTLVDRMRSFGPYIALHLRYEKDMLAFSGCTHELSKVESQELRFIRENTTYWKRKYINPIEERSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGEFHMADLRSRYPLLMSKEKLVSMEELEPFSSHGSQMAALDYIVSVESDVFVHSYPGNMAKAVEGHRRFLGRGRTISPDRKALVRLFDKLENGSMTEGKTLSNKIIDLHRRRLGFIRKRKGPVSGTKGLDRFRSEETFYANPLPGCLCRTESLSVNASRYR* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0867 539 PIRSF UCP009360 1 529 IPR024709 -
Vra5g0867 539 Pfam GDP-fucose protein O-fucosyltransferase 132 447 IPR019378 -
Vra5g0867 539 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 14 538 - -
Vra5g0867 539 PANTHER OS02G0726500 PROTEIN-RELATED 14 538 - -
Vra5g0867 539 MobiDBLite consensus disorder prediction 1 21 - -
Vra5g0867 539 CDD O-FucT_plant 132 453 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0867 Vra-Chr5 14602424 14606725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0867 76 529 Miscellaneous Gene Families AT1G22460 66.300 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0867 - - gmx:100807411 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0867 5 14602424 14606725 Vra5g0867 5 14602424 14606725 ECH