Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0858 ATGTCCAGGCCTCTACACAGAGGGGTACCTGTTCGGATCCCTGAAAGAAACAATGACTCGTGGGACTCCCAATCCAAAGATAAGACAGAAAAGGAAGGTTTTGATAGAAGATTTTCCTCTGCTCACCCCTCACCCTTGAGGTCTCCCTTTAGGTTGTTATCAGATAATTCTAATTCCATGTTAGGTATCACTGAGAATGGTTTATCATCTGACCCCTACATTATTGGCACTCCAAGAAATAGGCATAAGTTGATTCTTTTTTTCTTGAAGTTTAGTTTAGTGTTTGTAGTTATTCTTGCTCTTGCGGGGTCTTTTTGGTGGACCATCTCAATTTCAACTGCGTCAAGGGGTCACATTTATCATGGTTATAGAAGACTCCATGAGCAACTTGTATCGGACCTGTTGGATATAGGGGAGATATCTTATGCACCCTCAAGGCTGAAAGAATTGGAATTTTGTTATAAGGAGTTTGAAAATTATGTTCCTTGCTTTAATGTTTCCGACAATCTAGCTCTTGGTTTTTCTGATGGCAATGAGTTTGACCGGCAATGTGGCCATGAGCTCAGGCAAGATTGTTTATTACTTTCACCACCAAATTATAAAATTCCTCTTAGGTGGCCTACTGGAAGGGATATTATCTGGGTTGCTAATGTTAAACTCACTGCAGAGGAGGTTCTTTCTTCTGGAAGCTTAACCAAAAGGATGATGATGCTTGATGAAGAGCAAATTTCCTTTCGCTCAGCCTCTCTTATGTTTGGTGGTGTGGAAGACTATTCGCATCAAATCGCTGAAATGATTGGGCTCAGAAATGAATCCAACTTCGTAAAAGCAGGGGTTAGAACAATACTGGATATTGACTGTGGTTACGGTAGCTTTGGAGCACACCTCTTTCAGAATCAACTTTTAACTATGTGCATTGCAAGCTATGAGCCTTCTGGCAGTCAAGTTCAGCTTACACTTGAGAGGGGTCTTCCTGCTATGGTTGCTTCTTTCAATTCAAAACAATTGCCATATCCATCTCTCTCCTTTGACATGTTGCATTGTGCCAGATGTGGCATCGATTGGGACCGAAAGGATGGCACTCTCATGATTGAAGCTGATAGACTTTTAAGGCCAGGGGGTTATGTTGTGTGGACTTCACCGCTTACAAATGCTCGTGACAGAGTTAGTCAAGAAAGATGGAAGTTCATACAAAGTTTTGCTGAAAATCTTTGCTGGGACATGATTCCACAGCAAGATGAAACTGTCGTATGGAAGAAAACAAGTACAAAGGATTGCTACAGCTCAAGAAAGAACAGTTCTCCCCCTCCTTTATGTGGCAGAGGGTATGATGTAGAGTCTCCATATTATCGAGAATTGAAAAACTGCATAGGAGGAACACATAGCAGCCGTTGGATTTCTATTGAAAAGAGGGAAACTTGGCCTTCCATAGATCAATTGAACAAAAAGGATCTTGAACACTTTGGGTTGCAATCTGATGAATTTTCTGAGGATTCTGAGAGCTGGAGAGCATCAGTCCATAATTACTGGTCTCTTCTATCACCATTAATATTTTCTGATCATCCAAAGAGACCTGGTGATGAGGATCCTCCGCCACCTTATAACATGCTAAGAAATGTGCTAGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCACTGTTGCACGCTGGAAAATCTGTATGGGTAATGAATGTGGTACCTTTGAATGCACCCAACTACCTTCCCTTGATCCTGGACCGAGGATATGTTGGCGTTATGCATGATTGGTGTGAGGCCTTTCCAACGTACCCTAGAACGTATGACTTGGTGCATGCAGCAGGACTTTTGTCCCTTGAATTCGCTCAGCAGCACAGATGTGCGATGCTTGACGTGTTCATTGAAATTGACAGGATACTTCGGCCGGAGGGTTGGATTATAATTCGTGACACAGTTCCTATAATAGAGTCAGCCAGAGCTCTAACGAAACGGCTAAAGTGGGATGCTCGAGTCGTAGAAATTGAAAGTGACAGCGATCAGAGACTCCTGATCTGTCAGAAACCTTTCTTTAAGAAACAGGCAAATTAA 2067 0.4219 MSRPLHRGVPVRIPERNNDSWDSQSKDKTEKEGFDRRFSSAHPSPLRSPFRLLSDNSNSMLGITENGLSSDPYIIGTPRNRHKLILFFLKFSLVFVVILALAGSFWWTISISTASRGHIYHGYRRLHEQLVSDLLDIGEISYAPSRLKELEFCYKEFENYVPCFNVSDNLALGFSDGNEFDRQCGHELRQDCLLLSPPNYKIPLRWPTGRDIIWVANVKLTAEEVLSSGSLTKRMMMLDEEQISFRSASLMFGGVEDYSHQIAEMIGLRNESNFVKAGVRTILDIDCGYGSFGAHLFQNQLLTMCIASYEPSGSQVQLTLERGLPAMVASFNSKQLPYPSLSFDMLHCARCGIDWDRKDGTLMIEADRLLRPGGYVVWTSPLTNARDRVSQERWKFIQSFAENLCWDMIPQQDETVVWKKTSTKDCYSSRKNSSPPPLCGRGYDVESPYYRELKNCIGGTHSSRWISIEKRETWPSIDQLNKKDLEHFGLQSDEFSEDSESWRASVHNYWSLLSPLIFSDHPKRPGDEDPPPPYNMLRNVLDMNAHFGGFNSALLHAGKSVWVMNVVPLNAPNYLPLILDRGYVGVMHDWCEAFPTYPRTYDLVHAAGLLSLEFAQQHRCAMLDVFIEIDRILRPEGWIIIRDTVPIIESARALTKRLKWDARVVEIESDSDQRLLICQKPFFKKQAN* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0858 688 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 159 680 IPR004159 GO:0008168
Vra5g0858 688 MobiDBLite consensus disorder prediction 9 38 - -
Vra5g0858 688 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 194 387 IPR029063 -
Vra5g0858 688 MobiDBLite consensus disorder prediction 1 42 - -
Vra5g0858 688 Gene3D Vaccinia Virus protein VP39 244 417 IPR029063 -
Vra5g0858 688 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 19 686 - -
Vra5g0858 688 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 538 657 IPR029063 -
Vra5g0858 688 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 19 686 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0858 Vra-Chr5 14443271 14451544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0858 K23870 - gmx:100812530 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0858 5 14443271 14451544 Vra5g0858 5 14443271 14451544 ECH