LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra5g0855	ATGTCGACGCCGGAAACGGAATCGGCGGAACCCTCCTCCAATCACATTCACTCTCTTCCGTTAGTTGACCTCCACCTCTTGTCTCAGCCCGAACTCTACACCCTCTCCCTCTCTGGCGCCACTCACCGCCACAGTCGACCCAGCGACAACGATTCGGTCATTCCTAAAATCGACCGTTCCAATTTCAACGAATCCGCGGGCAGCCGCAAACAGACTTTCTCCAAACTACGCCTCAACAAGCGCAAACAAAATTGCGGGGTTCCCGCCTCCTCCTCCTCTTACCACATTCCGGAGCCCGTCGACCGAGAAAACTCCCAAATTATCTCTCTGCTGCAGCAACTCTTTGGCGTCGAGCCTCTCCGCAACGAGCTGCGCCCCGACCGCGGTGATGAGGCGGACCGCCAACTGTTTCCGGTCCATGTCGAGTTCAAACAACCGCCTCCTGTGCCCGTGGCGTTTCAGAACGTTCCGATTGACGTTATTGATGCTTCTATTAGGAAGAGGAAGCGCGGGCGGCCGAGGAAGAACGATAATTCGGTATCGGTTTTCGAGGAGGAGACCAAGAAGGTTAACGAAGAGGGCAGCGCACTGGTCACGGTCAACGAGAGGGGATTTGGTATGGACGCGGATGATTTGGATTATGATCCGTTTGGAGACGAGTTGAAGAGAAGGACTGAAGGGTTGGAGACGGAGCCGCAGTTGTTGGAATTTTTGGAGACTCTGAATGGAGAGTGGGCGAGTCAGAGGAAGAAGAGGCGGATTGTCCCGGCCAGTGATCTTAGCGACTTGTTGCCTGCCGGATGGAAGATAGTTATTACCCTTTTGAGGAGGGCAGGTCGTGCTTCTGTTGTTTGTCGCCGTTACGTAAGTCCTGGTGGGCACCAATTCGAGTCTTGCAAAGAAGCTTATGCGTACTTGCTTTCTGTTTCTGGTGTTCAAGATAAGGGCCATTTAAAATCTAGTTGTACTGATGATGGTGCTCAGCAATTGTCCAGTAGTATGAACATGGCATCTGAAAGTAGTGTTGGTCATGTCCCTGCCGGAGCCACGAAGACTGATGCCAATGCAAATTATTCGTCTATTCACTCTGGTCAAGAGAATCAGCTCCCAATATCATTATCAGTTGGGAGTGGAAATTTCAACAGTGATCTACCTTTGGGTTGTAAATCAGGAGATGCTAGTGATGACTTTAGGGGCTTTGACCATCAAACGGAAGATAAAAAACTGTTGGAGGCTGACAAGAATGATGGAAGTTCAGTTCAGGGATGTTCTCACGTGAATGATATAGTTTGTAATGTAGGCAATGAGAAGTTGGTTGGTGCTATTGAGTCCACTGATGCTGCTTGCAATCTTTATATTCCTTTAGTTTTCTCAACTCCCTTCTCCACTAATAATAGTGACAATGGTCAAATTTCAGAGGATATAAATGCTGCGACATGCATAGAAGGGGGCATTAGTAATTTTGCTAGTCAGGATAAAAATACCAGGTGCCCTGAAAGTGTTCCCTGTGGAGTTGACAACAATGGGCTTGGGCTTTCTGTGAAATTAGTAGAAGAGAGCACTCAGAAAATAAGTTTTGATAGCAGCACACTGGCTCCAAATTCTGAGGGGCAAATATTTGCTGGTAAAAGGTTAGAGGATAGACATCTTATCAGTTCACAGGAAGATATGGAAATTGCAGATGATAAGGTCATTAATGATGACAAAAAATTAATTGTGTGTGGCACAGACCGGGCTGAGTTTAAAGATGTTTTTACTGATGTTAAACTGCAGAGTAGTTCTGAGGGTTTTTCACTTGTCACATCTCATTGTGAACTTAAACATGCATCTCTAAGTAATATGGACAGGACCCAGACTTCCGAGTTGAAGGACTCTGCTGAGGAAAATATTTTTGACAGTGATCTATTTAGCTCATCTATTGATGAAAGAACATGTGTTCACAGTGGTTACATTAGTAATGTTCCTTTTAGTTCTTGCACACAAGATGCAGTTGAGTATGGTGGATTTGATTTTTCTTCTGATCTTAAATTAACTAAGGATGTTAGTGATAATCATATTCTTTCTAATGAGGATGCCGTGACAAGATGTTTACAGGAGAGGAGTTCCTTGAATGACCAAAATAGCATGATGGGCAATCTTTTGCATCGTAGTTCTCAAAGTAATTTATTTGCCCTAACACCTAATCAGCACCCTTCTGCTTTTCACGATAATGTGAATATCTGTGATGGAACCTTTGATGCACTCAAAGGTGTTGATGCTGGATACATGGAGCCTCAGTTGGGCATTGTTTCTCGCAGCAATATTGGTGTAGATGCATATACTACTGCAAGCATTATGCAGGGAAACTCACAAGGATGTGTATCTGTTCCTCTTGGTGGAAGTATATTAAACTTTGAGAAGAAAAGTGATGATGGTGTTAATAAAGCAAATAAGCCTTGCTTATCAGAAAAGGCTCAGAATGAAGTTGAAATATTCCAAACTGACTCTATGGGTCTACCCAAATTTCTTTAG	2511	0.446	MSTPETESAEPSSNHIHSLPLVDLHLLSQPELYTLSLSGATHRHSRPSDNDSVIPKIDRSNFNESAGSRKQTFSKLRLNKRKQNCGVPASSSSYHIPEPVDRENSQIISLLQQLFGVEPLRNELRPDRGDEADRQLFPVHVEFKQPPPVPVAFQNVPIDVIDASIRKRKRGRPRKNDNSVSVFEEETKKVNEEGSALVTVNERGFGMDADDLDYDPFGDELKRRTEGLETEPQLLEFLETLNGEWASQRKKRRIVPASDLSDLLPAGWKIVITLLRRAGRASVVCRRYVSPGGHQFESCKEAYAYLLSVSGVQDKGHLKSSCTDDGAQQLSSSMNMASESSVGHVPAGATKTDANANYSSIHSGQENQLPISLSVGSGNFNSDLPLGCKSGDASDDFRGFDHQTEDKKLLEADKNDGSSVQGCSHVNDIVCNVGNEKLVGAIESTDAACNLYIPLVFSTPFSTNNSDNGQISEDINAATCIEGGISNFASQDKNTRCPESVPCGVDNNGLGLSVKLVEESTQKISFDSSTLAPNSEGQIFAGKRLEDRHLISSQEDMEIADDKVINDDKKLIVCGTDRAEFKDVFTDVKLQSSSEGFSLVTSHCELKHASLSNMDRTQTSELKDSAEENIFDSDLFSSSIDERTCVHSGYISNVPFSSCTQDAVEYGGFDFSSDLKLTKDVSDNHILSNEDAVTRCLQERSSLNDQNSMMGNLLHRSSQSNLFALTPNQHPSAFHDNVNICDGTFDALKGVDAGYMEPQLGIVSRSNIGVDAYTTASIMQGNSQGCVSVPLGGSILNFEKKSDDGVNKANKPCLSEKAQNEVEIFQTDSMGLPKFL*	837

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra5g0855	836	PANTHER	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	1	767	-	-
	Vra5g0855	836	SUPERFAMILY	DNA-binding domain	260	308	IPR016177	GO:0003677
	Vra5g0855	836	MobiDBLite	consensus disorder prediction	54	72	-	-
	Vra5g0855	836	MobiDBLite	consensus disorder prediction	39	72	-	-
	Vra5g0855	836	PANTHER	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	1	767	IPR037472	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra5g0855	Vra-Chr5	14397978	14410499	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra5g0855	-		-	gmx:100780637	1167.53

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra5g0855	5	14397978	14410499	Vra5g0855	5	14397978	14410499	ECH