Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0841 ATGGCAATAGGCGGAACAGTTGCCGGTATGTACACGCGTTCTCCACCACTCTCTTCCTTCACCCCCACGCGCCTCTTCTCACGCTCTCATTTCGCTGCAAAGCTTCGATTTCCTCCTTCAATTCGACTTCGTGCTTCTTCTACTGCCGTCATCGACACCGAAACCAATCCAACAGAATCCGTCGTAGTTGAAAAGGAAGTGAGGAATAGCAGCAACCCGTTGGCTTGTCCCGTGTGTTATGATTCCTTGACATGGAATGGTGGTCCTGGTTTCTCCGTAGATACAATCAGCGGGTCTAATTTTCAATGTGGCACATGTCAGAAAACATATGTTGGTAACCAAACTCACATTGATCTCACCGCAACAGGTGGAGCTAAGAGCTACGGTGAAGTGATGCCAGTTTCCACAGAGCTTTTCAGGGTGCCATTGATATCATTTCTCTATGAGAGGGGCTGGCGTCAAACCTTTTCTGTGTGGGGTGGTTTTCCAGGTCCTGAGAAAGAGTTTGAATTGATGAAGGGTTTCCTAAAACCAGTATTGGGAGGAAATATAGTTGATGCTAGTTGTGCAAGTGGATTATTTTCAAGATTATTCGCAAAAAGTCAACTGTTTTCTTTTGTTGTTGCTCTAGACTACTCGGAAAACATGTTACAGCAATGTTATGAATTCATTCAGCAGGAAGAGAACTTCCCAAAAGAGAACTTAATCTTGGTTAGAGCAGACATATCTAGGCTCCCCTTTGTTTCTAATTCTATTGATGCTGTGCATGCTGGCGCCGCTCTACACTGTTGGCCTTCACCATTGGCAGCTGTTGCTGAAATAAGTCGTGTTTTACGACCTGGAGGCGTATTTGTTGCAACCACCTACATACTTGATGGTCCTTTTTCTATTATCCCATTTCGAAGTATATTACGGCAGAATCTAAGGCAAGCATCTGGGAGCTACAGCTTTCTCTCTGAACGTGAGCTTGAAGATCTCTGCAGGGCGTGTGGGCTGGTTGGGTTTAAATGCATTAGAAATGGGCTTTTTGTGATGATCTCTGCTAGAAAGCCCAGTTAA 1059 0.4495 MAIGGTVAGMYTRSPPLSSFTPTRLFSRSHFAAKLRFPPSIRLRASSTAVIDTETNPTESVVVEKEVRNSSNPLACPVCYDSLTWNGGPGFSVDTISGSNFQCGTCQKTYVGNQTHIDLTATGGAKSYGEVMPVSTELFRVPLISFLYERGWRQTFSVWGGFPGPEKEFELMKGFLKPVLGGNIVDASCASGLFSRLFAKSQLFSFVVALDYSENMLQQCYEFIQQEENFPKENLILVRADISRLPFVSNSIDAVHAGAALHCWPSPLAAVAEISRVLRPGGVFVATTYILDGPFSIIPFRSILRQNLRQASGSYSFLSERELEDLCRACGLVGFKCIRNGLFVMISARKPS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0841 352 CDD AdoMet_MTases 183 291 - -
Vra5g0841 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 350 IPR029063 -
Vra5g0841 352 Pfam Methyltransferase domain 186 285 IPR013216 GO:0008168
Vra5g0841 352 Gene3D Vaccinia Virus protein VP39 139 350 IPR029063 -
Vra5g0841 352 PANTHER OS08G0411200 PROTEIN 38 351 - -
Vra5g0841 352 PANTHER METHYLTRANSFERASE 38 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0841 Vra-Chr5 14204755 14208568 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0841 - - pvu:PHAVU_009G030200g 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0841 5 14204755 14208568 Vra5g0841 5 14204755 14208568 ECH