Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0813 ATGGCATATCCTATATATAGTAATCCGGGAGTAACCACTGATTTCACTGAAAATGAGACCAACATCCAGAAAAAGCATCATCCTTTACAGGTTGCGAAGCGCTTAGAGAAGTTTCCAAAATCCAGGAGAACAATTAACAACCTGAAAGATGGAATCATAAACCTTGGACGAGGCTTTCCGAACTTTGATGGTCCAGAGTTTATAAAGGAAGCAGCAATTCAAGCAATAAGGGATGGGAAAAATCAGTATGCACGAGGTTCTGGAGTTCCAGAGTTGAACATTGCTATTGCTGATAGATTTAGGAAAGATACTGGATTAGTCATAGACCCTGATAATGAAGTTACTGTTACAAATGGATGCTTGGAAGCAATTGCTGCAACTGTGCTAGGATTAATAAATCCCGGCGATGAGGTTATTCTCTTTTCTCCTTTATATGATTGTTATGAAGGTAATTTAGCCATGGCTGGTGCAAAAATAGTAAGCATCCCTCTGCAATCTCCAGATTTTGCTATCCCCATTGAAAAATTGAAGTCCATTATGTCAAGGAGTACACGTGCCATTCTTATAAATACTCCTCACAACCCTACGGGAAAGATGTTCTCTCTGCAGGAGCTCAATGCCATTGCATCCATTTGCATTGAGAACGATGTTCTTGTTTTTGCTGATGAAGTTTATCATAAGTTGGCATTTGATATGGAACACATTTCTATAGCTTCTTTGCCTGGAATGTTTGAAAGGACCGTGACAATGAACTCAATGGCAAAGACATTTAGCCTAACAGGATGGAGGATTGGTTGGGCCATAGCACCCTCACACCTGACATGGGGGCTGCGACAGGCACATTCTTTCATCACTTTCTCAAACGCCACTCCTTTGCAGTGTGCAGCTGCTGTAGCTCTTAGGGCACCAGAGTCTTATTATGTGGAGCTGAAGAGGGATTATATGAAAAAGAGGGCTATTTTGGTGGATGGATTAAAGGCCGTTGGCTTTAAGGTATTCCCACCCAATGGAACATTCTTTGTTTTAGCAGATCATACCCCTTTTGGATTGGAAAATGATGTTGCATTTTGTGAATATCTGCTTAAGGAGGTGGGGGTCCTGGCAATTCCTTGCAGTGTGTTTTGCTTCAATCCCGAAGAGGGAAAGAACCTAGTCAGATTTGCTTTCTGCAAGGATGATGAGACTCTTAGGGCCGCGGTTGAGAGGATGAAGGAGAAGCTTAGGAAATGA 1230 0.4203 MAYPIYSNPGVTTDFTENETNIQKKHHPLQVAKRLEKFPKSRRTINNLKDGIINLGRGFPNFDGPEFIKEAAIQAIRDGKNQYARGSGVPELNIAIADRFRKDTGLVIDPDNEVTVTNGCLEAIAATVLGLINPGDEVILFSPLYDCYEGNLAMAGAKIVSIPLQSPDFAIPIEKLKSIMSRSTRAILINTPHNPTGKMFSLQELNAIASICIENDVLVFADEVYHKLAFDMEHISIASLPGMFERTVTMNSMAKTFSLTGWRIGWAIAPSHLTWGLRQAHSFITFSNATPLQCAAAVALRAPESYYVELKRDYMKKRAILVDGLKAVGFKVFPPNGTFFVLADHTPFGLENDVAFCEYLLKEVGVLAIPCSVFCFNPEEGKNLVRFAFCKDDETLRAAVERMKEKLRK* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0813 409 Pfam Aminotransferase class I and II 52 402 IPR004839 GO:0009058|GO:0030170
Vra5g0813 409 Gene3D Aspartate Aminotransferase, domain 1 49 403 IPR015422 GO:0003824
Vra5g0813 409 PANTHER FI04487P 47 409 - -
Vra5g0813 409 PANTHER FI04487P 47 409 - -
Vra5g0813 409 SUPERFAMILY PLP-dependent transferases 46 408 IPR015424 -
Vra5g0813 409 CDD AAT_like 53 405 - -
Vra5g0813 409 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 252 265 IPR004838 GO:0003824|GO:0009058|GO:0030170
Vra5g0813 409 Gene3D - 65 303 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0813 Vra-Chr5 13815926 13820938 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0813 K23977 - gmx:100818968 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0813 5 13815926 13820938 Vra5g0813 5 13815926 13820938 ECH