Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0811 ATGAAGACAGCGAACATGGAAAATCAGAAGAGTGGGAGCAAGCTTACCAGAACCCACTCCTCGCTCCTTAGTTGTTCTTCCCCTGCAATCCGATCCTCCATCCACAGCCTCTCTTCCATCGTCACCAAAGAGGAACACGAATTGCAGGAACAGGAAAAGCTACTCCTCGATGTTGACGACGACAAGAACAACAAGCCCAAGAAACCCCAAGCCCGAACGCGTCCTCGAGCCCAAGCCCACAGGTCATCCGCCTATTCCGCCCTCGCGGTCTTTTTCCTCGGCGCGTGCTCGCTCTTATTCTACTTCTTCTACCTCGAGGTGTCCTCCTCGGAGAACGTTTTACTGGCGCTGATTTTCGTGGCCGTGGCGCTCTATTTTGTGTCCAAGAACAAGGGTCTGATTCAGAGATCCTTTTCCGCGGCGAAGCATTCGTGGGAGGAGAATGTCAAGCGGTTGGGGTTTTCGAAGGCGGTGGCGGCGAGGCCGGTGCAGTGGTTCATCGGAGAGCCTGCCGGGGCGGGAAGGAAGGCGGCGAAGATAGTGAGGGAAGGGGTGGAGTTTTACAGCAATGGGGATTTTTACGAGGGCGAGTTTCACAAGGGGAGGAGCAACGGGAGTGGGGTGTACCATTACTTCGTGAATGGGAGGTACGAAGGGGATTGGGTGGATGGAAGGTACGATGGGTACGGAATTGAAAGCTGGGCGAGGGGGAGTCGCTATAGGGGTCAATATAGACAGGGTTTGAGACACGGTTATGGTGTTTATAGGTTCTACACGGGGGACTCTTATTCCGGGGAATGGTGTAACGGTCAGAGCCATGGCGTTGGGCTTCAGACTTGCTCCGATGCTAGCTGTTACATTGGTCAGTTTAAGTATGGGGTCAAGCACGGTCTTGGCTGTTATCATTTTAGAAATGGTGATAGGTATGCTGGAGAGTATTTTGGGGACAAGATACATGGATTTGGAGTCTACCACTTCGCCAACGGCCACTGTTATGAGGGAGCATGGCACGAGGGTCGTAGGCAAGGTATTGGCTCATACACTTTTCGAAACGGTGACAGAAGATGTGGTGAATGGGATGCTGGCAACCTCAAGCAACCTTTACCACCATTATCCGATGTTGTTCTTCGAGCAGTTCAGGCTGCTAGGAAAACAGCAGAGAGTGCTATAAACCTTAAACGAGTGGATGACCAGGTTAACAAAGCGGTAATTGCTGCAAGCAAGGCTGCCACAGCTGCTAGAGTTGCTGCTGTGAAAGCTGTTCAGAACAGGATGGATGGAAAATTTTGCGTTACTGAAGTCTGA 1305 0.518 MKTANMENQKSGSKLTRTHSSLLSCSSPAIRSSIHSLSSIVTKEEHELQEQEKLLLDVDDDKNNKPKKPQARTRPRAQAHRSSAYSALAVFFLGACSLLFYFFYLEVSSSENVLLALIFVAVALYFVSKNKGLIQRSFSAAKHSWEENVKRLGFSKAVAARPVQWFIGEPAGAGRKAAKIVREGVEFYSNGDFYEGEFHKGRSNGSGVYHYFVNGRYEGDWVDGRYDGYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYSGEWCNGQSHGVGLQTCSDASCYIGQFKYGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHEGRRQGIGSYTFRNGDRRCGEWDAGNLKQPLPPLSDVVLRAVQAARKTAESAINLKRVDDQVNKAVIAASKAATAARVAAVKAVQNRMDGKFCVTEV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0811 434 MobiDBLite consensus disorder prediction 55 78 - -
Vra5g0811 434 MobiDBLite consensus disorder prediction 1 20 - -
Vra5g0811 434 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 177 428 - -
Vra5g0811 434 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 21 175 - -
Vra5g0811 434 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 234 362 - -
Vra5g0811 434 Pfam MORN repeat 217 239 IPR003409 -
Vra5g0811 434 Pfam MORN repeat 240 261 IPR003409 -
Vra5g0811 434 Pfam MORN repeat 263 282 IPR003409 -
Vra5g0811 434 Pfam MORN repeat 194 211 IPR003409 -
Vra5g0811 434 Pfam MORN repeat 286 308 IPR003409 -
Vra5g0811 434 Pfam MORN repeat 309 330 IPR003409 -
Vra5g0811 434 Pfam MORN repeat 332 354 IPR003409 -
Vra5g0811 434 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 177 428 - -
Vra5g0811 434 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 21 175 - -
Vra5g0811 434 SMART morn 238 259 IPR003409 -
Vra5g0811 434 SMART morn 215 236 IPR003409 -
Vra5g0811 434 SMART morn 284 305 IPR003409 -
Vra5g0811 434 SMART morn 192 213 IPR003409 -
Vra5g0811 434 SMART morn 307 328 IPR003409 -
Vra5g0811 434 SMART morn 261 282 IPR003409 -
Vra5g0811 434 SMART morn 330 351 IPR003409 -
Vra5g0811 434 Gene3D - 269 314 - -
Vra5g0811 434 Gene3D - 224 268 - -
Vra5g0811 434 Gene3D - 315 374 - -
Vra5g0811 434 Gene3D - 178 223 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0811 190 364 Acyl Lipid Metabolism Gene Families AT1G21980 36.000 8.38e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0811 - - gmx:100818442 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0811 5 13794600 13796947 Vra5g0811 5 13794600 13796947 ECH