Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0796 ATGCCTTCTGCACCTTCGAAAATCTACGCAGACGATGTGAGCCTTCTGGTTGTGACGCTAGACACCAATCCTTTCTTCTGGGCCACTTTCCCCTTCCCCTTCGCCGAGTTCCTCTCCCAAGTACTCGCCTTTCTCAACTCGATCCTGCTCCTCGGCCAGCTCAACCAGGTCATCGTCATCGCCACTGGATGCAACTCCTGCGCCTATGTGTACGATTCCTCTTCCGAACGGAACCACGGTGCCACCACCGGCACAATGCCCGCGCTTTATTCCAACTTACTCCACAATATCAACGAGTTTCTCGCTAGGGACCGGCAATTAGACGCTCTTCGAAAAACGGGAACCGTGCCTTCTTCGCTCCTATCGGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGCTTAGGACCTATGCCTCCGCAGCCTCGGATTTTATGTTTGCAAGGCGCTGCCGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCGTTCTATGGTTCCTATAGATTCTTGTTATATTGGCTCCAACAACTCTGCATTCCTCCAGCAGGCTTCTTACATAACTAGTGGAATATATTACAAGCCTCCTCAATTGGAAGGGCTTTATCAATATCTTTCAACAGTATTTGCAACTGATTTACATTCTCGCGCATTTTTAAGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCATCGTGCTTCTGCCATAAGCGAACAATTGACATGGGCTTCGTATGTTCTGTATGCTTGTCCATTTTCTGTGAGCATCATGATAAGTGTTCAACCTGTGGGTCTGTATTTGGTCAAGCTCAACTAGATGCTTCAGCAGCCAACAGGAAAAGAAAGGCGTGA 879 0.4812 MPSAPSKIYADDVSLLVVTLDTNPFFWATFPFPFAEFLSQVLAFLNSILLLGQLNQVIVIATGCNSCAYVYDSSSERNHGATTGTMPALYSNLLHNINEFLARDRQLDALRKTGTVPSSLLSGSLSMALCYIQRAFRLGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQRSMVPIDSCYIGSNNSAFLQQASYITSGIYYKPPQLEGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKRTIDMGFVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAANRKRKA* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0796 292 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 1 281 IPR004600 GO:0000439|GO:0006289|GO:0006355
Vra5g0796 292 Gene3D von Willebrand factor, type A domain 10 221 IPR036465 -
Vra5g0796 292 Pfam Transcription factor Tfb4 13 273 IPR004600 GO:0000439|GO:0006289|GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0796 K03143 - gmx:100810574 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0796 5 13572062 13577257 Vra5g0796 5 13572062 13577257 ECH