Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0792 ATGGAAGAGAGTTTCGTTTGCCAGTGGAGCGATATCAGATCTCTCTTGTCCATCCTTCAGTGGTGGGCTTTCAATGTCACCGTGATCATCGTCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCCCTATCAGTTTCATGCGTCCACTTTATCTGTTCAGCCATTGGGGGATATGTGGTTATAAAGGTGCTGAAACTTAAGCCACTGATAACTGTTGACCCTGAAGATCGCTGGCGAAGAATCTTTCCAATGTCATTTGTGTTCTGTATTAACATCGTGTTGGGGAATGTGAGCCTACGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTCACACCTGCGACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGACTGGCGTATTTGGGCTTCTCTTGTACCCATTGTTGGAGGGATTCTTCTGACATCTGTAACAGAGCTTAGTTTTAACATGTTGGGATTTTGTGCTGCATTATTTGGCTGTCTGGCTACTTCTACAAAGACTATTCTTGCAGAATCTCTTCTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACCATGATCTTGGCACTTCCTGCATTGTTACTTGAAGGCAATGGAATCCTTGAATGGTTTGGTACCCATCCATATCCTTGGTCGGCTCTCATCATTATTTTTAGCTCCGGGGTGTTGGCTTTCTGTCTTAACTTCTCAATTTTTTACGTGATTCACTCCACCACTGCTGTGACATTTAATGTTGCCGGAAATCTTAAGGTTGCAGTGGCTGTCCTTGTTTCTTGGCTGATATTTAGAAACCCAATTTCATATTTAAATTCTGTTGGATGTGCCGTGACTCTTGTGGGCTGTACATTCTATGGTTATGTGAGGCACATGCTCTCCCAACAGCCAGCAGTCCCTGGAACTCCTCGGACCCCCAGGACTCCAAGGACCCCCCGGAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGGTCTAG 1038 0.4316 MEESFVCQWSDIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSAIGGYVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMLGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPALLLEGNGILEWFGTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNSVGCAVTLVGCTFYGYVRHMLSQQPAVPGTPRTPRTPRTPRSKMELLPLVNDKLEDKV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0792 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Vra5g0792 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 300 - -
Vra5g0792 345 PANTHER GDP-MANNOSE TRANSPORTER GONST5 3 329 - -
Vra5g0792 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
Vra5g0792 345 PANTHER SOLUTE CARRIER FAMILY 35 3 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0792 Vra-Chr5 13531278 13535863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0792 1 345 Organic Solute Cotransporters AT1G77610 89.306 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0792 K15285 - gmx:100778350 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0792 5 13531278 13535863 Vra5g0792 5 13531278 13535863 ECH