Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0791 ATGAATGCCTATATTTTCGGTATCGTTGTTCCTCTCCTCGTCATCCTCTTCCGCAGCCGCAGTTCCACCAAGCGCCGCGGCCTCCCAGCCGACGTTGGCGGCGAGCGCGGCCTCGCGCTGCGGAACCACCGCTTCACTTCGCCACTCAGTTCTGCCTGGGAGGGCGTTACGACGCTGGCGGAGCTCTTCGAGCGCGCATGCAGGGAGCATCATGACCGTGTGCTGCTCGGCACGCGCGTGGAGATCGCGCGTGAAGTGGACTTCTCTTATGGTAGAAGGCTCGAGAAGCTTCACCTGGGGGACTACCACTGGCTTACTTACGGGAGAGTCTTCGAATCCGTCACGAGTTTCGCTTCCGGTTTGGCGTTGCTCGGTCATCGCAAGGAAGAGCGCGTGGCTATATTCGCTGAAACCAGAGATCGTTGGTTTATTGCACTGCAGGGATGCTTCAGGAGGAATGTGACAGTTGTGACCATATATTCGTCATTGGGAGAGGAAGCTTTGTGTCACTCGTTGAATGAGACAGATGTCACAACAGTGATATGTGGGCGCAAAGAATTGACGTCACTAGTACATATCAGTGGTCAACTTGATTCTGTGAAACGTGTTATATGCATTGACGACGACAAGATTTCATCTGATTTGTTTGCTCAGACTGGATGGAAAATCACTTCCTTTGCTGACGTTGAGAGCCTTGGTAGAGACAATCCTGTTGAGGCTGATTTACCCCTTTCAGCCGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGATTGCCCAAGGGTGTAATGATGACACATGGCAATGTCTTGGCAACAGTCTCTTCGATAATGATTATAGTTCCTAACCTTGGGCCAAAGGATGTCTATCTTGCCTACTTACCGATGGCTCACATCCTTGAATTAGTAGCTGAGAATTTGATTGCAGCTGTTGGAGGTAGTATAGGATATGGAACTCCCTTGACTTTAACTGATACATCAAACAAAATAATGAAGGGGAAAAGGGGGGATGCCACTGCATTGATGCCAACTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGCGAAGGAGTGCTCAAGAAGGTAAATGCAAAAGGAGGATTGTCAAAGAAATTGTTTTATTTAGCCTTTGCACGAAGGTTGCTTGCACTTAATGGTAGCTGGTTTGGTGCTTGGGGCTGGGAAAAAGCTCTATGGAATCTTCTTGTGTTCAAGAAGGTTCAAGCAATTTTGGGTGGTCGCATTCGGTTTATACTATGTGGTGGTGCTCCACTCTCTGGTGACACCCAAAGATTCATCAACATTTGTCTTGGTGCTCCAATAGGTCAAGGATATGGTCTCACTGAGACTTGTGCTGGTGGGACATTCTCTGATTTCGACGATACGTCTGTGGGCCGTGTTGGGCCACCTATTCCTTGCTCATATATTAAACTAATTGACTGGCCCGAAGGTGGATATTCAACTAATGACTCGCCCATGCCTCGTGGTGAAATTGTGATTGGAGGTCCAAATGTCAGTCTTGGTTACTTCAAAAATGAAGAAAAAACAATAGAATCTTACAAGGTTGATGAAAGAGGAGTAAGGTGGTTCTACACTGGTGATATCGGGAGATTTCATAAAGATGGTTGCATTGAGATCATTGATCGGAAAAAGGACATAGTTAAACTCCAGCATGGGGAATATGTGTCCTTGGGAAAGGTGGAGGCAGCTCTTTCTACCAGTCCCTACGTCGACAATATCATGTTGCATGCTGACCCTTTTCATAGCTATTGTGTGGCACTTGTCGTAGCTTCTCATCCGGCATTGGAGCAATGGGCTTCACAGCAAGGAATTGCTTATTCTAATAATTTTTCAGAACTGTGCAGGAAAGAAGAAACTGTGAAGGAGGTGCATGCATCACTTTTAAAGGAAGCAAAGAAGGGTCGTCTGGAAAAGTTTGAGATTCCTGCAAAAATTATTTGCCTTTCTGAGCCATGGACTCCTGAAAGTGGCCTAGTCACTGCAGCTCTTAAGCTGAAGAGAGAGATCATTAGAAAGGCTTTTCAAGAGGAGCTTTCAAAGTTATATTCCTCCGTCTAG 2088 0.467 MNAYIFGIVVPLLVILFRSRSSTKRRGLPADVGGERGLALRNHRFTSPLSSAWEGVTTLAELFERACREHHDRVLLGTRVEIAREVDFSYGRRLEKLHLGDYHWLTYGRVFESVTSFASGLALLGHRKEERVAIFAETRDRWFIALQGCFRRNVTVVTIYSSLGEEALCHSLNETDVTTVICGRKELTSLVHISGQLDSVKRVICIDDDKISSDLFAQTGWKITSFADVESLGRDNPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSSIMIIVPNLGPKDVYLAYLPMAHILELVAENLIAAVGGSIGYGTPLTLTDTSNKIMKGKRGDATALMPTVMAAVPAILDRVREGVLKKVNAKGGLSKKLFYLAFARRLLALNGSWFGAWGWEKALWNLLVFKKVQAILGGRIRFILCGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPIPCSYIKLIDWPEGGYSTNDSPMPRGEIVIGGPNVSLGYFKNEEKTIESYKVDERGVRWFYTGDIGRFHKDGCIEIIDRKKDIVKLQHGEYVSLGKVEAALSTSPYVDNIMLHADPFHSYCVALVVASHPALEQWASQQGIAYSNNFSELCRKEETVKEVHASLLKEAKKGRLEKFEIPAKIICLSEPWTPESGLVTAALKLKREIIRKAFQEELSKLYSSV* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0791 695 ProSitePatterns Putative AMP-binding domain signature. 251 262 IPR020845 -
Vra5g0791 695 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 10 693 - -
Vra5g0791 695 Gene3D - 49 552 IPR042099 -
Vra5g0791 695 Pfam AMP-binding enzyme 99 560 IPR000873 -
Vra5g0791 695 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
Vra5g0791 695 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0791 Vra-Chr5 13513421 13520625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0791 24 693 Acyl Lipid Metabolism Gene Families AT2G04350 62.315 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0791 K01897 - gmx:100778889 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0791 5 13513421 13520625 Vra5g0791 5 13513421 13520625 ECH