Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0788 ATGGCTCAAACCATGTTGCTCATGTCTAGTGTCTCTAGCAGCCACTCCCTGGGTTTGAAGAAAGACCTTTTCCAACAATTGAGGCCTAAATTCTCTCAACTCTCATTCAATCCTCTTCCATCGTCATCTTCTTTCTCTTCTTCACCTCGTACATTCACAACTCTTGCTCTCTTCAAATCAAAGACCAAGGCCCCTCCTGCCAAGGTTGTAAAGCCAAAGCAAAAGGTTGAAGATGGTATCTTTGGCACTTCTGGAGGGTTTGGTTTTACTAAGCAGAACGAGCTCTTTGTGGGTCGTGTTGCCATGCTTGGTTTTGCGGCATCATTGTTGGGTGAAGCAGTAACTGGGAAAGGAATTCTTTCACAATTGAATCTGGAAACTGGAATTCCCATTTACGAAGCAGAGCCTCTTCTTCTGTTTTTCATCCTTTTCACGCTGCTGGGAGCTATTGGAGGTTTAGGTGACCGTGGGAAATTTGTCGATGACGAACCCAACACCGGAGGTGTCATTCCTTCAGGAAAAGGCTTCAGAGAAGCACTTGGTCTCGGTTCAGGTCGTTTGTTTGGATTCACGAAAGCTAACGAGCTATTTGTGGGAAGATTGGCTCAATTGGGATTCGTTTTCTCTTTGATTGGAGAGATTATTACTGGGAAGGGAGCACTCGCCCAGCTCAACATCGAGACTGGAGTACCGATCAACGAAATCGAACCCCTTGTGTTGTTCAACGTTCTTTTCTTCTTCGTCGCAGCTTTGAATCCTGGAACTGGCAAATTCGTTACGGATGAGGAGGATGATTAG 798 0.4561 MAQTMLLMSSVSSSHSLGLKKDLFQQLRPKFSQLSFNPLPSSSSFSSSPRTFTTLALFKSKTKAPPAKVVKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEAVTGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDEPNTGGVIPSGKGFREALGLGSGRLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFVAALNPGTGKFVTDEEDD* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0788 265 Pfam Chlorophyll A-B binding protein 73 210 IPR022796 -
Vra5g0788 265 Gene3D Chlorophyll a/b binding protein domain 51 131 - -
Vra5g0788 265 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 188 251 - -
Vra5g0788 265 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 175 - -
Vra5g0788 265 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 188 251 - -
Vra5g0788 265 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 1 175 - -
Vra5g0788 265 SUPERFAMILY Chlorophyll a-b binding protein 73 244 - -
Vra5g0788 265 Gene3D Chlorophyll a/b binding protein domain 132 236 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0788 K03542 - gmx:100807355 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0788 5 13476581 13478162 Vra5g0788 5 13476581 13478162 ECH