Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0787 ATGGGGGAAAATAGAGGCTCATTGGAGAGGAAATCTTCTGGTGAAACTGAAAATTCAGAGTCTGCGTCATTCGTTTCTGAGAACCGACTGGGTGAAGCGCTTGAGGCATTGAATGAATCTCCTATTGAGCATAACCAGTCACCCGAAGTCGCCTCAAAAATTGTGGTCATACCTGAAGATATTAATATGTCATTTTTCTATTCACAATCACCTGAAGTCACCTCACATGCAACAGACAGCGTAAATGATGATTTAACAGATGAAGATGTAAATGGAGTAATGATAAGTATATTAAAGGATAGAGATGAACCTGATGGATTGAGGAATATGTCAGAAAAGCTGTCTGCAGCGCTCGTGAATGTAAGTGCCAAAGAAGATTTGGTTAAGCAACATGCCAAAGTCGCTGAAGAAGCTATTTCAGGCTGGGAAAAGGCTGAAAATGAAGTGACAAGTTTAAAGAAACAAGTCGAGGCACTGACCCTCAGAAATTCAACATTGGAAGATCGAGTCACACATCTAGACAGTGCACTTAGGGAGTGTGTTAGGCAGCTTAGACAAACAAGGGAAGAGCAGGAGCAAAGCATTCATGATGCTGTACTAAAGAAAACACGTGAGCTAGAATCTTCCAAAGCTACACTAGAGAAGCAGCTCATGGAGGTGCAGAGCAAATCAAATTTTTCGAATGCTAGTTCTCCATCATCAATTGATTTTGATAAGTACCAGAAGGTCGAATATTTGGAGAGAGAGAACGCGGTTCTCAAACATGAGCTCCAAGCTCTATCTGAAAAACTAGAACTCAGGACAATAGAGTGGAATTTAAGTACTCAAACAGCCGAGATGGCTAGCAAGCAACATTTAGAAAGCATCAATAAAGTTGCCAAGCTCGAGGCTGAGTGCCGGAGACTGACAAACATGGCCTCTAGAGCTTCCACTACATCATCCTCTTGTGTTGAATCTCTCAACGATGGCCAATCCAACAGTGGAGAGAGGACAAGGGCAGTGGAGATTGATACAACAAGGAAGAGTGGCTCAGAACCAGACATAGATGAATTAAGTGGTTCTGATTCATGGGCATCTGCGCTAATTGCTGAGCTTGATCAGTTCAAGAATGAAAAGTACAAACAAATTTCATCCGGTTCTGTTAACATTGATCTCATGGATGATTTTCTTGAAATGGAACGACTCGCAGCACTCCCAGATACTAAGAGTGAGAGCTTTATCAAAGAGTCACTTGTTGCCAATGATTGCATTCACGAAGAAAGCTCCATCAGAGATGAGTTTGACGCTACCATTCGGCAAATTGATGAACTAAAAGAGAAGCTAGAGAAGGCCAAAGCTGAGAAAGAGGAAGTGAAGACATGTTTAATGAAAAGTGAGAGTGTCATTGGGACATCACAGCTTAAAATGAGGGAGGCAGAAAGAAAATTGGAGGAGTTGCAAAGAGAGCTAGAGAACGCCTACAAATCAAAGCAAGTGTTAGAAAATGAACTAACGAGCATGCAGTCCGAGGCTAAATCAATAACTGCAAAAGTTCACTTACTAGAAGCAGAAGTTGATAAGGAAAAGGCCATATCAGTAGGAATTGAAAAAAGGTATAAGGAATTAGAGGAAGAACTAGAAAGAAAGAAGCAGGAAGAGAAATTCGGTTCAATAACCTCTTACAGTGAAATGAAGCTAAAGCAGGAGGACCTAGCATTAGCTGCAGGAAAGCTTGCTGAGTGCCAGAAAACAATAGCGTCTTTGGGGAATCAATTAAGTTCACTAGCAACACTAGAAGATTTCCTGATTGACACTACCTGCATTCCAGAACTTTCTTCAACTCCATTCAGTGCTAGAGACAGTGCAGTCATGTTGAAGTCGCATTCAAATGGCACATACTCAACTGAAAGAGATTCCGATTCTTCAAGTAAAAATGAAGAAAGCTCACCACCATCCTCATCAACCAACTTGCCAAAGCATGATTCTGAGAAGAGTATAAATGGTTTTGTAAATATTTTCTCTCAAACCGAGAGTGGACTCCAACTAGAAATTTAG 2034 0.411 MGENRGSLERKSSGETENSESASFVSENRLGEALEALNESPIEHNQSPEVASKIVVIPEDINMSFFYSQSPEVTSHATDSVNDDLTDEDVNGVMISILKDRDEPDGLRNMSEKLSAALVNVSAKEDLVKQHAKVAEEAISGWEKAENEVTSLKKQVEALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEQSIHDAVLKKTRELESSKATLEKQLMEVQSKSNFSNASSPSSIDFDKYQKVEYLERENAVLKHELQALSEKLELRTIEWNLSTQTAEMASKQHLESINKVAKLEAECRRLTNMASRASTTSSSCVESLNDGQSNSGERTRAVEIDTTRKSGSEPDIDELSGSDSWASALIAELDQFKNEKYKQISSGSVNIDLMDDFLEMERLAALPDTKSESFIKESLVANDCIHEESSIRDEFDATIRQIDELKEKLEKAKAEKEEVKTCLMKSESVIGTSQLKMREAERKLEELQRELENAYKSKQVLENELTSMQSEAKSITAKVHLLEAEVDKEKAISVGIEKRYKELEEELERKKQEEKFGSITSYSEMKLKQEDLALAAGKLAECQKTIASLGNQLSSLATLEDFLIDTTCIPELSSTPFSARDSAVMLKSHSNGTYSTERDSDSSSKNEESSPPSSSTNLPKHDSEKSINGFVNIFSQTESGLQLEI* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0787 677 MobiDBLite consensus disorder prediction 638 656 - -
Vra5g0787 677 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 486 676 - -
Vra5g0787 677 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 11 493 - -
Vra5g0787 677 MobiDBLite consensus disorder prediction 310 351 - -
Vra5g0787 677 SUPERFAMILY Tropomyosin 432 588 - -
Vra5g0787 677 MobiDBLite consensus disorder prediction 620 656 - -
Vra5g0787 677 MobiDBLite consensus disorder prediction 1 47 - -
Vra5g0787 677 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 486 676 - -
Vra5g0787 677 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 11 493 - -
Vra5g0787 677 Pfam Filament-like plant protein, long coiled-coil 420 590 IPR008587 -
Vra5g0787 677 Pfam Filament-like plant protein, long coiled-coil 241 305 IPR008587 -
Vra5g0787 677 Pfam Filament-like plant protein, long coiled-coil 335 408 IPR008587 -
Vra5g0787 677 Pfam Filament-like plant protein, long coiled-coil 124 222 IPR008587 -
Vra5g0787 677 Coils Coil 243 263 - -
Vra5g0787 677 MobiDBLite consensus disorder prediction 1 16 - -
Vra5g0787 677 Coils Coil 203 223 - -
Vra5g0787 677 Coils Coil 142 169 - -
Vra5g0787 677 MobiDBLite consensus disorder prediction 333 348 - -
Vra5g0787 677 MobiDBLite consensus disorder prediction 310 332 - -
Vra5g0787 677 Coils Coil 424 454 - -
Vra5g0787 677 Coils Coil 462 545 - -
Vra5g0787 677 Coils Coil 181 201 - -
Vra5g0787 677 Coils Coil 292 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0787 Vra-Chr5 13464778 13470028 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0787 - - gmx:100783676 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0787 5 13464778 13470028 Vra5g0787 5 13464778 13470028 ECH