Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0778 ATGGAAGCCATGCTGCCTTTGGTGTTGACGAGAACGGCACAGATGATGGATGATGTGTTGTTACAGGTAACAGTCGTTGCAGACAGAGACGGAGGTGGACAGGTTGGAAGCATTGAAGACGAGATCCACTGTCCCAAGAAACCTGTTGAAGATGGCAAAGTCACGAATAGAATTGGCTGCTTCGTGTTCAATTTGAGGAGGAACGTCGGTGATCATCCAATGAGTAGTCCAAGAGGGTGTTGTTTATATAGGCATAGAAGTTCAGATAGTTCGTGCTTTCCTTGTATATATTCTTCGTCTCGAAATGCAAGCAGAAAACCCGACCAGACATCGAGCAAGAACTATGATTTTATGTCTGCAGCTTCTTCATTGAACAGAAGCGGGAATTTAAGATCAATGCCTCCTCATCTGAACTCAACGAATGCCAGCAGCGCCAGGTTCAACAACCCAATCATGTATTCCAATTCATCTGGGATGCTTAAACCCCCACCTATCGAGAAAAAACTAGAATGCACTCTGGAAGAGTTGTGCTACGGATGCAAGAAAAAGATGATGATCACAAGGGATGTCCTCACAGATACAGGGGAAATAGTTCGAGAGGAAGAATTGCTAACGATAAATGTGCAACCTGGATGGAGGAAAGGAACAGAGATTAAATTTGAAGGAAAAGGGAATGAGAGACCAGGAGCATACAGAGAAGATATAGTATTTATTATCTCCGAGAAAAGACACGAGTTATTTAGAAGAGACGGTGATGATTTGGTATTGAGAGTTGAGATTCCCTTAGCAAAGGCACTTTCTGGGTGTACGATATTGATTCCACTGTTGGGTGGAGACCACATGAATCTTAAACTTGACGACATCGTACACCCTGGCTATCAGAAGATCGTCCCCGAACAAGGCATGCCTATCTCCAAAGAACCAGGAAACAGAGGAAACTTGAATGTTACGTTTCGAGTTGTGTTTCCGACACATCTCACAAGTAATCAAAGATCAGAGGTTGTTCGTATTTTACAGGATTCTTGA 1026 0.4327 MEAMLPLVLTRTAQMMDDVLLQVTVVADRDGGGQVGSIEDEIHCPKKPVEDGKVTNRIGCFVFNLRRNVGDHPMSSPRGCCLYRHRSSDSSCFPCIYSSSRNASRKPDQTSSKNYDFMSAASSLNRSGNLRSMPPHLNSTNASSARFNNPIMYSNSSGMLKPPPIEKKLECTLEELCYGCKKKMMITRDVLTDTGEIVREEELLTINVQPGWRKGTEIKFEGKGNERPGAYREDIVFIISEKRHELFRRDGDDLVLRVEIPLAKALSGCTILIPLLGGDHMNLKLDDIVHPGYQKIVPEQGMPISKEPGNRGNLNVTFRVVFPTHLTSNQRSEVVRILQDS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0778 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 67 339 - -
Vra5g0778 341 Gene3D - 161 243 - -
Vra5g0778 341 PANTHER FAMILY B PROTEIN, PUTATIVE-RELATED 67 339 - -
Vra5g0778 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 247 332 IPR008971 GO:0006457|GO:0051082
Vra5g0778 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 245 IPR008971 GO:0006457|GO:0051082
Vra5g0778 341 CDD DnaJ_C 163 326 - -
Vra5g0778 341 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Vra5g0778 341 Gene3D - 244 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0778 Vra-Chr5 13345572 13349104 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0778 K09519 - gmx:100782604 365.925