Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0776 ATGGGCTGCGGCGGCTCCAAGGTCGAGGACTTCCCCGCGGTGGCTCTGTGCAGAGAGCGGAAGAGGTTTCTAAAAGCCGCATCGGAGCAACGCTACGCTCTGGCAGCGGCACACGTGGCGTATTTTCATTCGCTCAGGGAAATCGGCGACGCTCTTCGCAAATTCGCTGAACAAGACCTGACTACCACCACCGGTTCTTCCTCTCCGGTTCTCACATTACCTTCCGAAACCAAGAGCATCAACAATAACAAACTTTCATCCTCTTCTGCTTCAATCTCTCACGCAGATTCCCCCGAGGGTTCCCACTTGCCTCTCTCTTCTGGATCCGAATTGAGTTCTCCTTCTCCTACCCATTCTCATTCTCATTCTCACTCGCATTCTCATTCTTCTTCGCCTCAAATTCACGGTTCCCCAGAACCCGACCCACCTCCATACGGGTACTATCAAAATTACCAATACGCCCATTACATGAAAAGGTCTATCCCCAATGGAAAACCAATGGTATATGAAGAACCAGAGAAGCACGTCGCAACAATTGGACAATGGCCCGATCCTTCTTACGGTTACGGTTTCTACGGGTTTCCGGGTGGGGATTATCCTTACTACCCTCCCCCGGGACCGTCGTTATCTCCGCCGCGTCCCCCTCCCGCGCCTCCGTCTCCTCCTCGCGTCTCCACTTGGGATTTCCTTAACGTCTTCGATAGCTTCGAGAACGGGTATCCGATTTATCCCCCTCGGTTCGGGTCGAGAGCGAGCAGTCCGGATTCGAAGGAGGTGAGGGAGAGAGAGGGGATTCCCGAATTGGAAGACGAGATGGAGCACGAAGTCCCGAGAGAGGCTCCTGCGAAGGAGAAGGAAGGTAAAAAGGTGGCTGGGGAAAAGGGATCCGCTGGAGTGAGGGATTTCGGGGAAGGGCCTTCGAACACTAAAACGGTCCCGGTGCAGCAGGTGAGTAGCAGCGAGGGGAGTTCCAAGACGGTGAGGTTCCATGACGCCAGCGATAACGGTTCCGTTGAAAAAGAGATTATGAGCAGTCCCGACACTGTGGTTTCCGAAGAGCATGGTGCGAAGAAAGGAGTGAGCTTCGAGATTGATGAAGCGACGGTTACGGCGGTGGAAGGTGACTCTTCCGTTCTGAGTAGTGTAACCACTTTGTCGGCGCACGGAACCAGGGATCTGCGTGAGGTTGTGGTGGAGATTCAGGATGAGTTTGTGATGGCATCGAATTTTGGGAAAGAGGTTGCGTTGTTGCTTGAGGTTTGCAAACCGCCTTATCGGTCTAGGGTTGCTGCACTTAGAGTTATCTTGTCCAGAATCTTGCAGATGGTAGCACCTTTGAGGTTACCCTCAGATCCCCCCTCTATACAATTTTCTTCTAGGAAAATAAAATTGGCACGAGCATACTGTGGGGAACCTGGGAAAGACTTCAAGACAAATCCAGAAAATCTTTCATCCACATTGGAGAAACTTTATGCGTGGGAGAAGAAATTGTATAAGGAAGTCAAGGATGAAGAGAGGTTACGGGCCATTTATGAGAAAAAGTTCAAGAGACTGAAAACATTGGATAATCTAGGAGCTGAATCTAGTAAAATTGATGCTACTAGAGCATCAATTAGGAAGTTGCAAACAAAAATCAATATTTGCATCAGAACCGCTGAAACTATAATGGGAAGAATACATAAATTGAGGGATAATGAATTGCAGCCTCAACTTGCGGCATTGATTAATGGATTCACGAAAATGTGGAAATTCATGCTCAAATGCCACCAGAAACAGTTCCAAGCTATCATGGAGAGTAAAAGTCAGTCTATTAAGATTAACCTTGGTGTGTCAGGAGATGAAGTTCTGAAGGCCATTGTAGAACTTGAAAAGGAGCTTTTGAATTGGTGCAGTCAGTTCAACATTTGGGTTAAGACTCAAAAAACTTATGTCAAGAATTTGAATGAGTGGCTCTTGAGATGCCTTCCTAATGAACCTGAAGAAACAGCCGACGGTATTGCCCCTTTCTCTCCAAGTCGGCTTGATGCTCCACCAGTTTTTATTATTTGTAATGATTGGTATCAAGCAATGACTAGAATTTCAGAAACGGAGGTGGCAGAGGCCATGCATGAATTTGCTCAAAAACTACATGAGTTATGGGAAAGGCAAGATGAGGTGCAACGCCAGAGAATCAAAGCCGAGTATCTCAGAAAGGACTTTGAGAAGCAACTTAGAACATTACGCACAGAAATGGGAGACTTAGAACATGATAAAGTTTCAGGAAAGACTGCATTGTCGAAGTTCACTTCTGATAGCGGTGTTTCACCACTAGATGATCTAAAGGTGGACTTAGATTCTATGAAGAAGAAATTACATGAAGAGAGGGTCAAGCATAAAGAAGCCGTCAAACTTGTTCATGATGCAGCTAATAATAGTTTACAGGCTGGTTTGATTCCCATTTTTAAGACATTAGAGAGTTTCACTTCAGAGGTGGTGAAAGCTCATGAACAAGTTAGGCTTAAAAATTCTGCTGGGGATTCGTAG 2523 0.4677 MGCGGSKVEDFPAVALCRERKRFLKAASEQRYALAAAHVAYFHSLREIGDALRKFAEQDLTTTTGSSSPVLTLPSETKSINNNKLSSSSASISHADSPEGSHLPLSSGSELSSPSPTHSHSHSHSHSHSSSPQIHGSPEPDPPPYGYYQNYQYAHYMKRSIPNGKPMVYEEPEKHVATIGQWPDPSYGYGFYGFPGGDYPYYPPPGPSLSPPRPPPAPPSPPRVSTWDFLNVFDSFENGYPIYPPRFGSRASSPDSKEVREREGIPELEDEMEHEVPREAPAKEKEGKKVAGEKGSAGVRDFGEGPSNTKTVPVQQVSSSEGSSKTVRFHDASDNGSVEKEIMSSPDTVVSEEHGAKKGVSFEIDEATVTAVEGDSSVLSSVTTLSAHGTRDLREVVVEIQDEFVMASNFGKEVALLLEVCKPPYRSRVAALRVILSRILQMVAPLRLPSDPPSIQFSSRKIKLARAYCGEPGKDFKTNPENLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKKFKRLKTLDNLGAESSKIDATRASIRKLQTKINICIRTAETIMGRIHKLRDNELQPQLAALINGFTKMWKFMLKCHQKQFQAIMESKSQSIKINLGVSGDEVLKAIVELEKELLNWCSQFNIWVKTQKTYVKNLNEWLLRCLPNEPEETADGIAPFSPSRLDAPPVFIICNDWYQAMTRISETEVAEAMHEFAQKLHELWERQDEVQRQRIKAEYLRKDFEKQLRTLRTEMGDLEHDKVSGKTALSKFTSDSGVSPLDDLKVDLDSMKKKLHEERVKHKEAVKLVHDAANNSLQAGLIPIFKTLESFTSEVVKAHEQVRLKNSAGDS* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0776 840 MobiDBLite consensus disorder prediction 253 295 - -
Vra5g0776 840 MobiDBLite consensus disorder prediction 201 222 - -
Vra5g0776 840 MobiDBLite consensus disorder prediction 308 331 - -
Vra5g0776 840 MobiDBLite consensus disorder prediction 247 354 - -
Vra5g0776 840 PANTHER FAMILY PROTEIN, PUTATIVE (DUF630 AND DUF632)-RELATED 1 835 - -
Vra5g0776 840 PANTHER UNCHARACTERIZED 1 835 - -
Vra5g0776 840 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vra5g0776 840 Coils Coil 770 790 - -
Vra5g0776 840 MobiDBLite consensus disorder prediction 61 135 - -
Vra5g0776 840 Pfam Protein of unknown function (DUF632) 393 710 IPR006867 -
Vra5g0776 840 Coils Coil 730 750 - -
Vra5g0776 840 MobiDBLite consensus disorder prediction 61 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0776 Vra-Chr5 13295768 13301602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0776 391 717 Acyl Lipid Metabolism Gene Families AT2G27090 31.844 1.23e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0776 - - gmx:100782069 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0776 5 13295768 13301602 Vra5g0776 5 13295768 13301602 ECH