Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0775 ATGGCGGGTAAAATTGCGATTTGTTCGTCTGTGTCAGTGTTCTTGTTCTTTCTCATTCTAGCATCCCCTTCTCAAATCTATGCTCACGAATCGGAGACTCAGGAGTTCGTTCTCACATTGGATCACTCCAACTTTTCCGACACCGTCAAGAAGCATAATCTGATTGTCGTCGCGTTCTACGCACCAAGGTGTGACCGCAGTAAGAAGCTTGCACCGGAGTATGAAAAAGCTGCTTCTATTCTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGACGCGGATGGCGAGAAGAATAAAGACCTTGCAACAGAATATGAAGTTAGGGCTTACCCAACAATTAGGATCCTGAGAAATGGGGGAAAGAATGTTCAAGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGCTGAGTATCTGAAGAAACAAAGTGGTCTTGCTTCAGCTGAAATTAAATCTGTAGATGATGCTACCGCAGTTATTGGTGAAGATAAAGTTGCTATTGTTGGAGTGTTTCCGAAATTTTCTGGGGAGGAGTTTGATAACTTCACTGCGTTATCAGAAAAGTTGCGTGCTGACTATGACTTTGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAATCATCTGTTGCTGGGCCCATAGTAAGGTTATTCAAGCCATTTGACGAACTTTTTGTTGACTTTCAGGATTTTCATGTGGAAGCTCTAGAGAAATTTGTCGAAGAATCTAGTGTGCCTGTTGTGACTGTCTTTAACAGTGATCTGAGAAATCACCCTTTTATCACCAAATTCTTCAATAGTCCCAATACGAAGGTGATGTTGTTTATCAACTTCATTGCTGAAGGTGCTGAAACTTTCAGATCAAAATACCGAGAAACTGCCGAGCAATATAGACAACCGGGTGTAAGCTTTCTGTTGGGAGATGTCAGGTCTACTGCAGGTTCTTTTCAGTATTTCGGAGTGAGGGAAGACCAAGTACCTCTAATTTTAGTACAACGTAATGATGGGAAGAAATTTCTTAAACCCAATTTGGAACCTGATCAAATTTCAACTTGGTTCAAGGCATACAAGGATGGAAATATTGCACCATATTTTAAGTCTGAACCTATTCCTGAAGCTAACAACGAACCTGTTAAAGTGGTAGTTGGGGACAGTCTCCAGGACATAGTCTTCAACTCTGGGAAGAATGTTCTGCTGGAATTTTATTCTCCCTGGTGTATTCATTGCACGGAGTTGACTCCAACATTGGAGGAAGTTGCTGTCTCATATCAAAGCGATGCTGATGTTATTATTGCAAAAATGGATGGAATTGCCAACGATATCTCAAGTGACTCCTTTGAAGCCAAAGGTTATCCAACTGTGTACTTCAGGTCAGCAAGTGGAAAGATATCAAAATACAGTGGCAATAGGACCAAGGAAGACATCATAGAATTCATCGAAAAGAATCGGGATAGACCTGCTCATCAAGAACAAGCAACGGGTTACAAAGAAAATGGAAAAGATGAGCTTTGA 1521 0.4162 MAGKIAICSSVSVFLFFLILASPSQIYAHESETQEFVLTLDHSNFSDTVKKHNLIVVAFYAPRCDRSKKLAPEYEKAASILSSHDPPVVLAKIDADGEKNKDLATEYEVRAYPTIRILRNGGKNVQEYKGPREADGIAEYLKKQSGLASAEIKSVDDATAVIGEDKVAIVGVFPKFSGEEFDNFTALSEKLRADYDFGHTLNAKHLPRGESSVAGPIVRLFKPFDELFVDFQDFHVEALEKFVEESSVPVVTVFNSDLRNHPFITKFFNSPNTKVMLFINFIAEGAETFRSKYRETAEQYRQPGVSFLLGDVRSTAGSFQYFGVREDQVPLILVQRNDGKKFLKPNLEPDQISTWFKAYKDGNIAPYFKSEPIPEANNEPVKVVVGDSLQDIVFNSGKNVLLEFYSPWCIHCTELTPTLEEVAVSYQSDADVIIAKMDGIANDISSDSFEAKGYPTVYFRSASGKISKYSGNRTKEDIIEFIEKNRDRPAHQEQATGYKENGKDEL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0775 506 Pfam Thioredoxin 37 143 IPR013766 -
Vra5g0775 506 Pfam Thioredoxin 382 484 IPR013766 -
Vra5g0775 506 Gene3D Glutaredoxin 375 486 - -
Vra5g0775 506 SUPERFAMILY Thioredoxin-like 35 146 IPR036249 -
Vra5g0775 506 ProSiteProfiles Thioredoxin domain profile. 20 146 IPR013766 -
Vra5g0775 506 SUPERFAMILY Thioredoxin-like 150 249 IPR036249 -
Vra5g0775 506 CDD PDI_a_family 38 141 - -
Vra5g0775 506 SUPERFAMILY Thioredoxin-like 348 486 IPR036249 -
Vra5g0775 506 Gene3D Glutaredoxin 145 249 - -
Vra5g0775 506 MobiDBLite consensus disorder prediction 482 506 - -
Vra5g0775 506 PANTHER PROTEIN DISULFIDE ISOMERASE 13 494 - -
Vra5g0775 506 Pfam Thioredoxin-like domain 173 357 - -
Vra5g0775 506 PANTHER PROTEIN DISULFIDE-ISOMERASE 13 494 - -
Vra5g0775 506 CDD PDI_b'_family 266 360 - -
Vra5g0775 506 ProSiteProfiles Thioredoxin domain profile. 359 487 IPR013766 -
Vra5g0775 506 TIGRFAM ER_PDI_fam: protein disulfide isomerase 37 506 IPR005792 GO:0003756
Vra5g0775 506 SUPERFAMILY Thioredoxin-like 247 378 IPR036249 -
Vra5g0775 506 CDD PDI_b_family 149 245 - -
Vra5g0775 506 CDD PDI_a_PDI_a'_C 380 482 - -
Vra5g0775 506 Gene3D Glutaredoxin 24 144 - -
Vra5g0775 506 Gene3D Glutaredoxin 250 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0775 Vra-Chr5 13276539 13281392 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0775 K09580 - gmx:100170705 790.03