Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0770 ATGAAATTCCGTTTCTCCATCCTGCTCCTATCAATCCTCCTCGCAGTCTCGGCGGCGGTTTCTGTCGCCGAGCCTACTCCCTCCGCTGCCTACAACCGCGTGCTGTTTCCTGACCGGAGATGCCAGAAGGCGATGTCGGAGAACAGCACAAGGCTCGGCGCGTCACCGGCGGCGGCGGAGTGCGAGGTGTGGAGCGAGGCTTGTTCGGAGGCGGTGCTGAAAGTAGCGCGGCAGTCGGAGACAGCGGAGTGGCTGAGAGGTATTCGGCGGAAGATCCACGCAAATCCTGAGTTGGCGTTTGAGGAAATCGAGACGAGTCGCTTGGTGAGAGAGGAGTTGGATCTGATGGAAGTTAACTATCGGTATCCCCTCGCGAAGACCGGTATTCGAGCTTGGATCGGCACTGGTGGTCCTCCTTTTGTTGCCATCAGAGCTGATATGGACGCACTTCCCATTCAGGAAGCTGTGGAGTGGGAGCACAGGTCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGACGCACACGTTGCCATGCTTCTTGGCGCTGCCAAGATTTTGAAAACTCGAGAGCATCTATTAAAGGGAACTGTAATTCTGATATTCCAGCCAGCCGAAGAAGCTGGAAATGGAGCAAAACGAATGATGCAAGATGGTGCTTTGGAGGACGTGGAAGCAATATTTGCAGCTCATGTATCCCATGAACATCCAACAGGAATAATCGGGTCAAGGCCTGGGCCCCTCCTTGCTGGTTGTGGGTTTTTCAGAGCCGTCATTAGAGGCAAAAAGGGTTTTGCTGCCGATCCTCACCGTTCTGTCGATCCTGTTTTGGCTGCTTCGGCTTCTGTTATCAGCTTACAGGGCATTGTCTCCCGCGAATCAAATCCACTCGATTCTCAGGTTGTCTCTGTAACTTCGTTTAATGGAGGCAACAATCTGGACATGATACCAGACACAGTGGTTCTCGGTGGGACTTTCAGAGCGTTCTCTAACACCAGCTTTTACCAGTTACTTGAAAGAATAGAACAGGTGATTGTTGAACAGGCAAGTGTGTACAGATGCTGGGCAGAAGTGGATTTCTTTGAAAAGGAGTACACGATTTATCCTCCAACAGTAAATGATGAGAGAATGTATGAGCATGTGAAGAAGGTATCTGTTGATTTGCTGGGTCAGAAGAATTTCAGGGTAGTTCCACCTATGATGGGTGCTGAAGATTTCTCCTTCTACTCCGAGGTGGTTCCCTCAGCTTTCTTCTACATAGGTATAAGGAATGAAACATTGGGGTCTACTCATACCGGACATTCTCCCTATTTCATGATTGATGAAGACGTTCTACCAATAGGTGCTGCTACTCATGCCACTATTGCAGAGAGGTATCTCATTCAACATGACTAA 1395 0.4996 MKFRFSILLLSILLAVSAAVSVAEPTPSAAYNRVLFPDRRCQKAMSENSTRLGASPAAAECEVWSEACSEAVLKVARQSETAEWLRGIRRKIHANPELAFEEIETSRLVREELDLMEVNYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEHRSKVAGKMHACGHDAHVAMLLGAAKILKTREHLLKGTVILIFQPAEEAGNGAKRMMQDGALEDVEAIFAAHVSHEHPTGIIGSRPGPLLAGCGFFRAVIRGKKGFAADPHRSVDPVLAASASVISLQGIVSRESNPLDSQVVSVTSFNGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLERIEQVIVEQASVYRCWAEVDFFEKEYTIYPPTVNDERMYEHVKKVSVDLLGQKNFRVVPPMMGAEDFSFYSEVVPSAFFYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAATHATIAERYLIQHD* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0770 464 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 30 463 - -
Vra5g0770 464 CDD M20_IAA_Hyd 85 460 IPR044757 GO:0009850|GO:0016787
Vra5g0770 464 SUPERFAMILY Zn-dependent exopeptidases 78 462 - -
Vra5g0770 464 PIRSF Amidohydrol_AmhX 73 464 IPR017439 GO:0016787
Vra5g0770 464 PANTHER PEPTIDASE M20 FAMILY MEMBER 30 463 IPR017439 GO:0016787
Vra5g0770 464 Pfam Peptidase family M20/M25/M40 142 457 IPR002933 GO:0016787
Vra5g0770 464 Gene3D - 250 368 - -
Vra5g0770 464 SUPERFAMILY Bacterial exopeptidase dimerisation domain 251 360 IPR036264 -
Vra5g0770 464 TIGRFAM amidohydrolases: amidohydrolase 86 448 IPR017439 GO:0016787
Vra5g0770 464 Gene3D Zn peptidases 87 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0770 Vra-Chr5 13193167 13200963 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0770 K21604 K14664 gmx:100785666 823.542