Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0759 ATGTTAGTGCAGCTCAAACACACTCCCATGATGAAGAAGACAACCCCCTCACCTTTTCCGTTTGTAGCAGTGCTACTGTTAACGCTAAGCTGTGCGGCGGAGGAGGAGGCTCCCACCACCATCATCTTCACCACCCTCGGCAGATCCTTCTACGCTTTCGACATCTACTCTCTTCCACTTCACCAACAATCTCTAAACCCTAGCCAAGAACTTCAGCTCACCGATGGCCGCTCCGTTAATTTCAACGGCCATTTCATTTCCAATGCTTCCGCTATCCAACTCCCTGCACACTCTCCTCCTCTCCAACTCGTATACATAACGGAGAGAAACGGCTCCCCCTCCATATACTACGACGCCGTTTATACTTCCACCACCACAACCAGATCCACTCATGAATCTGTTGCCGCAAAAAGAATCCAAATCCCTCTGTTACCGAACAAGCCCACCGACACTTATCCAGTCTCCATCAAAGACAAACCCAGTGTCACCCCCGATGGCGAATTTTTAATATACGTTTCCACACACGAGGACCCTGGTGTACCACGGGCCAGTTGGGCCGCTGTTTACTCCACCCACCTCCAATCGGGCCTCACCAAGAGACTCACCCCCTACGCTGTCGCTGATTTCAGCCCAGCCCTCTCCCCTTCCGGTCTCTGGACCGCTGTTGCTTCCTACGGCCCAGATGGATGGGCCGGCGAAGTGGAGGATCTTACCACAGACATCTACATCTTCCTCACTCGCGACGGAACTCACCGAGTCAAAATCGTCGAGCACGGAGGCTGGCCCTCCTGGGTCGACGATCGGACTCTATACTTCCACCGCCGAGGTGACGACCAGTGGTGGAGCATTTACAAAGCGATTATCCCCTTCAACGGTCCCGTTTCCGTTGACTCTGTTACCATCGAGCGAGTCACTCCACCAGGTCTCCACGCCTTCACACCCGCCACCTCCCCAGACAACCACAATTTCATCGCCGTCGCAACGAGAAGACCGGGCTCAAGCTTTCGTCACATCGAATTATTCAACCTGGTGAATAACGAATTCACGGAGCTGACTCGATTGGTCTCACCTCGTTCTCACCACCTCAACCCCTTCATCTCACCGGATGCATCCCGTGTAGGCTACCACAAGTGCAGAGGAGAACCCAACGCTGACAGCAGCCCCCAGTTTTCACTCGAAAACGTTAGGAGCCCCGTCCCCGGTCTATCTCTATTCCGGTTCGTCGGTTCTTTCCCGGTTTTCTCACCCTCCGGAGACCGCATCGCGTATCTTAACCTTCCAGGGATTTACGTGGTGAACCGGGACGGCTCAAACCTGCGTAAGATTTCCAACGCGTTGGCGTTTTCCACGGCTTGGGACCGGGTTCGACCCGGTGTGATATACACTGCGATTGGGGAAACCTTTGCCTCTGAGAGCTCGCAGGTTGATATTGTGTCCATTGACGTTGATAACGAGAACAGTGTGAAGAGGTTGACCTTGGACGGAAAGAACAACGCGTTTCCGTCACCCTCGCCGGATGGGAAATGGATCGTGTTTCGGTCGGGTCGGTCGGGTCATAAGAATCTTTACATAATGGATGCTGTTGATGGAGAGAGTAAGGGGCTTCAAAGATTGACGGAGGGTCCGTGGACTGACACCATGTGCAGCTGGTCACCGGATGGGAAATGGATCGCTTTCGCGTCGGACCGGCATGCCCCGGGAACCGGGAGTTTCGAGTTGTACCTGATCCACCCGGATGGAAGCGGGCTGCGGAAGGTGATTGAGAGCGGGTCGGCCGGGAGGACGAACCACCCGTATTTTAGCCCCGATGGGAAGAGCATAACTTTTACTTCGGACTATGCGGGTATATCCGCGGAGCCAATCTCGAACCCGCATCACTACCAGCCCTATGGTGAAATATTCAGGGTTAGATTGGATGGGTCGGGTATAGAGAGACTGACCCATAACTCGTACGAGGATGGAACACCCGCTTGGTCACCCAAGTATATACGGCCAATGAATGTTGAGATGGCAAAGGGTGGACCCTACTGTTCCTTCGAAGATTGTCATTGGCTCAACATTATGCCCAATTCCTCCTCAGCTTTCGCTGCTGCTCTCTAG 2100 0.5381 MLVQLKHTPMMKKTTPSPFPFVAVLLLTLSCAAEEEAPTTIIFTTLGRSFYAFDIYSLPLHQQSLNPSQELQLTDGRSVNFNGHFISNASAIQLPAHSPPLQLVYITERNGSPSIYYDAVYTSTTTTRSTHESVAAKRIQIPLLPNKPTDTYPVSIKDKPSVTPDGEFLIYVSTHEDPGVPRASWAAVYSTHLQSGLTKRLTPYAVADFSPALSPSGLWTAVASYGPDGWAGEVEDLTTDIYIFLTRDGTHRVKIVEHGGWPSWVDDRTLYFHRRGDDQWWSIYKAIIPFNGPVSVDSVTIERVTPPGLHAFTPATSPDNHNFIAVATRRPGSSFRHIELFNLVNNEFTELTRLVSPRSHHLNPFISPDASRVGYHKCRGEPNADSSPQFSLENVRSPVPGLSLFRFVGSFPVFSPSGDRIAYLNLPGIYVVNRDGSNLRKISNALAFSTAWDRVRPGVIYTAIGETFASESSQVDIVSIDVDNENSVKRLTLDGKNNAFPSPSPDGKWIVFRSGRSGHKNLYIMDAVDGESKGLQRLTEGPWTDTMCSWSPDGKWIAFASDRHAPGTGSFELYLIHPDGSGLRKVIESGSAGRTNHPYFSPDGKSITFTSDYAGISAEPISNPHHYQPYGEIFRVRLDGSGIERLTHNSYEDGTPAWSPKYIRPMNVEMAKGGPYCSFEDCHWLNIMPNSSSAFAAAL* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0759 699 Gene3D - 144 394 IPR011042 -
Vra5g0759 699 Gene3D - 410 531 IPR011042 -
Vra5g0759 699 Gene3D - 532 626 IPR011042 -
Vra5g0759 699 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 39 681 - -
Vra5g0759 699 SUPERFAMILY Tricorn protease N-terminal domain 410 660 - -
Vra5g0759 699 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Vra5g0759 699 Pfam WD40-like Beta Propeller Repeat 160 181 IPR011659 -
Vra5g0759 699 Pfam WD40-like Beta Propeller Repeat 596 612 IPR011659 -
Vra5g0759 699 Pfam WD40-like Beta Propeller Repeat 536 574 IPR011659 -
Vra5g0759 699 Pfam WD40-like Beta Propeller Repeat 489 524 IPR011659 -
Vra5g0759 699 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 39 681 - -
Vra5g0759 699 SUPERFAMILY DPP6 N-terminal domain-like 160 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0759 Vra-Chr5 12950947 12953247 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0759 - - gmx:100791865 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0759 5 12950947 12953247 Vra5g0759 5 12950947 12953247 ECH