Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0756 ATGGATGAGTTCGGTGTTTTGACCGAAAGGTTCGGTCTCAAACCACAAGGAAAATCCGCTCCGATGGCCAGGGCATCGACAAAGCGACCTCCAATTGTCTCGGATTCCCCAACACGCTCTAATTCCAAATCCACCCTAAACGGATCCCCATCTCCCCAAAGTTCCTCTTTTGATTTCAATTTCAATTACGGAGTTTTCAGCAACAGTAGCGATAGCAAAACGCAACATTTCGATGATATCTTCGGCGGTAACGCCAAATCCAACGGCGCTTCGTTCGACTACGATTCCATATTCGCCGGATCTAATAAACCGGTTTCCACGTCGTCTTATGTGGATGACATATTCGGTGGGGTGCAGGCGAAGAGTGTCGGCGTTGATGATCTGCTAGATAAGATGGGTGGATTAAATACAAACACCAACAATCGAAACTACAAAACACCCGATTCTGATGATTTCATCTCTGGCTTTGGTGTTTTCAATAATGGTGTTGAGATGAATAAGCCAAGTGTTACTCCGAACAAACCTGCTGCCGCGTCCCACGATGATCCCTTTTTGATATTTGAAACCGCTTCAGGCTCGGCGTCTTCAGAATCATTCCTGGACTCGCTGGGGCAGAAAACTAAGTTGAATAATTCTAAAGGGCCAAAAGGAGGCTCCCCAATACTGAAGTCCCCTCCCAGGCCAATGAGTAAAGTTAATAGGTCAAATATATCATCAATAGATGAGTTTGAGAGTTTTGTCATGGGTGGGGCACGGACTAATGCTAGTAGTATAAAGGCCAATGTTAACGCTGCAGAGACTAAGCCAAACTCGTCAGTTAAGATAAACAATGGTAAAAGAGTTCCAGATGTGAAAGTGAGTCAGTCAAATGCCGTGGATGATCTTGAATCCATCTTCAGCATGGGCTCTCGATCAAGCAGTGTGCCAAAGTCAAGGACTACAACTATGCAGACGAAGAGCAAAGGGAAACCTGAGGTGTCACCAAGAGTTCCATCAGGATCCCCAGCCAGTGAGATGAAACCTCCCACAATGACCTCTTTTGATGACCTATCACTGATTTTTGGTGGCTCCCCATCATCTGAATTCCAGGAGATTGAAGGTGAAACTGAGGAAAGACGAAAAGCAAGATTAGGACGTCATCAGAGGACACAAGAACGAGCGTTAAAAGCAGTGGCTGATATGAACCAGCGTGATATTCAAACTAAGATGGAGCAAGAAGAGAGGCGGAGAATTGCTGAAAGTGCGGATGTTCAGATAAGGCGCTGGTCTGCAGGGAAAGAAGGCAATATGCGGGCTTTGCTGTCAACTCTACAATATGTTCTTTGGCCAGAATGTGGTTGGCAGCCAGTGTCTCTGACAGATATGATAACTTCCGCTGCTGTTAAAAAGGTGTATAGAAAAGCAACTTTATGTATTCACCCAGATAAAGTCCAACAGAAAGGTGCTACCCTGGAGCAGAAATACATAGCAGAGAAGGTTTTTGACATTCTTAAGGAATGTTGGACCAAGTTCAACGCGGAAGAGCTTTCTTAG 1533 0.4521 MDEFGVLTERFGLKPQGKSAPMARASTKRPPIVSDSPTRSNSKSTLNGSPSPQSSSFDFNFNYGVFSNSSDSKTQHFDDIFGGNAKSNGASFDYDSIFAGSNKPVSTSSYVDDIFGGVQAKSVGVDDLLDKMGGLNTNTNNRNYKTPDSDDFISGFGVFNNGVEMNKPSVTPNKPAAASHDDPFLIFETASGSASSESFLDSLGQKTKLNNSKGPKGGSPILKSPPRPMSKVNRSNISSIDEFESFVMGGARTNASSIKANVNAAETKPNSSVKINNGKRVPDVKVSQSNAVDDLESIFSMGSRSSSVPKSRTTTMQTKSKGKPEVSPRVPSGSPASEMKPPTMTSFDDLSLIFGGSPSSEFQEIEGETEERRKARLGRHQRTQERALKAVADMNQRDIQTKMEQEERRRIAESADVQIRRWSAGKEGNMRALLSTLQYVLWPECGWQPVSLTDMITSAAVKKVYRKATLCIHPDKVQQKGATLEQKYIAEKVFDILKECWTKFNAEELS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0756 510 MobiDBLite consensus disorder prediction 365 383 - -
Vra5g0756 510 MobiDBLite consensus disorder prediction 358 383 - -
Vra5g0756 510 MobiDBLite consensus disorder prediction 31 55 - -
Vra5g0756 510 MobiDBLite consensus disorder prediction 301 322 - -
Vra5g0756 510 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 219 - -
Vra5g0756 510 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 264 509 - -
Vra5g0756 510 MobiDBLite consensus disorder prediction 301 342 - -
Vra5g0756 510 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 264 509 - -
Vra5g0756 510 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 219 - -
Vra5g0756 510 MobiDBLite consensus disorder prediction 1 55 - -
Vra5g0756 510 Gene3D DnaJ domain 380 509 IPR036869 -
Vra5g0756 510 SUPERFAMILY Chaperone J-domain 361 507 IPR036869 -
Vra5g0756 510 MobiDBLite consensus disorder prediction 205 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0756 Vra-Chr5 12919376 12927309 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0756 - - pvu:PHAVU_009G128700g 886.33