Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0749 ATGATGGCTCGCACTGTCTGCACGTGCCACATGGTGTTCTCCGCCGACCGGATTACTCCGACCGTCGTGTCTGTGTTCTCTGGCATTGACAACATCAGACTGTTGCCTTTCCGCTTCCAACTTCGAAGGAACACACACCTCCTCACTGCTCAACTTTCCAATTCTTTCTCCAATTTCGGATTTCATTCTCACTCTCAGTGTTTGAATTCCGTTCAATCGCATGTTCCATCACGGTTGCCTTGGATGGGTCCATTTCCGGGTGATATTGCTGAAGTGGAGGCATATTGTAGGATATTTAGGAATTCTGAAAGCCTTCATTCTGCTTTAGTGGATGCCTTGTGTAACCCGATCACTGTCGAATGTAGTGTTTCCTATGAAGTTCCGTCTGACGAGAAACGGCTTCTAGAGGATAAAATAGTATCTGTCCTTGGATGCATTGTGGCCCTTGTGAATAGTGGGAGGCGGGATCTTCTTTCTGGAAGATCATCGATTGTGACTCCCTTTCGTGCTGCAGAGGTTGGTGCGATGGAGGATACACTTCCTCCACTTGCCCTTTTCAGGAGTGAGATGAAGAGGTGTTGTGAGAGCTTACATGTTGCTCTTGAGAACTATTTAGTTCCTGGTGATGATCGGAACTTGGATGTGTGGAGGAAACTTCAGAGACTGAAGAATCTGTGCTATGATTCTGGCTTTCCTCGTGGGGAGGATTGTCCATGTCCTTCGCTGCTTGCGAATTGGAGTCCTGTGTGTTTATACACTCCCATAGAGGACATGGAATCCAAAGAATCTGAAGCAGCTTTTTGGACAGGTGGGCAGGTAACGGAAGAAGGTCTAAAGTGGTTACTTAATAAAGGATATAAGACCATCATAGATCTCAGAGAAGAAGATGTAAAAGATAGCTTCTATCAAGCAGCTGTGTATGATGCTATTTCATCTGGAAGTATTGAGTTGGTCAGGATCCCTGTTAAAGATGGGACTGCACCTACGATGGAACAGGTTGAGAGGTTTGCATCTTATGTTTCAAATTGCAGTAAAAGACCAATTTATCTTCATAGCAAGGAAGGAATTCGGAGAACATCTGCCATGGTCTCTAGATGGAAGCAGTACATTACACGTACTACATCAGAGTTTGTTTCTAATCAAGCAGTTATTTCCAATGTCGTGTTATCAGATTCCACAAATGGATCTGGAAAAATGGAGGACTCAATGATTGCCGAGGGGTCCTTCCAGGAAAAGGATACCAATTTGCTGCGCGAGGGTGCAACACATGGTTCTGCTGCCTCATTTGACTCATGTAACTCTTTAAAGACGAATAATGAAAAAACAAAAAGCAATGGGGGCATAAGTCAACTTACTGCTGATAGTACGGCCTCATCACAAGTCACTGGTGCTTCTGGGGAAGGATCTTTTCCTAGTTTCTCAAGTAAAATTAACCCTTTAGAAGCTCAAATTCCTCCTTTTGATATTTTTTCCAAAAGGGATATGTCCACATTTTTGGGAAGTAGGAAGATGTCAAAACCCTCTTATTTCAGTTATCAGGTTAAAAGAGTGGAATGTCTGCCAGAGTCAAGGAGCTTTGAACCTAAAATTGTGGGCCGAGCGAAAAGTTCCAATGGGTCAGCGAGTATGAGTAATTCCCATTCTGCTTGGACAACAATTAATGGGTATAGTGAGGGGGAAATGAATTACAGGGCTGATGCCAATATCTCTACTACTGTGAACAGTGATATTGATAATGTAAATACTAACTCCCAAAGGACGGGAGATGATAAAGATAAGGCTAGGTTAGCCTTACGAGATGAAGACTTGGGGCTTATTGAAGGAGACATGTGTGCATCATCAACTGGGGTGGTAAGGGTGCAGTCGAGGAAGAAAGCAGAGATGTTCTTAGTACGAACGGATGGATATTCTTGTACAAGAGAGAGGGTGAGTGAATCCTCTTTGGCCTTTACTCATCCCAGCACCCAACAACAGATGCTATTATGGAAATCTACGCCAAAGACTGTTTTAGTGTTGAAAAAGCTAGGAGATCATCTCATGGAAGAAGCTAGAGAGGTTGCTTCTTTTCTGTATCACCAAGAGAAAATGAATGTATTTGTGGAACCAGATGTGCATGATATATTTGCAAGCATTCCTGGGTTTGGATTTGTCCAGACCTTCTATAGTCAGGATACTGGTGATCTACACGAGAAAGTGGACTTTGTAGCCTGTTTGGGGGGAGATGGTGTTATACTGCATGCTTCGAATCTGTTCAGAGGTGCTGTTCCCCCTGTTGTGTCATTTAACCTTGGTTCTCTTGGTTTCCTGACTTCCCATAATTTTGAAGACTACAAGCAGGACTTACAACAAATTATCCATGGTAATAGTGCACAAGATGGAGTGTACATCACTCTAAGAATGCGTCTTCGATGTGAAATTTTTCGAAAGGGTAAAGCTGCACCAGGGAAAGTATTTGATATTCTCAATGAGGTTGTTGTTGATCGGGGTTCTAATCCATACCTGTCAAAGATCGAATGTTATGAACATGGTAGACTTATAACCAAGGTACAAGCTGATGGAGTCATTGTGGCCACCCCTACTGGAAGCACTGCCTATTCTACAGCTGCTGGAGGTTCCATGGTCCATCCAAATGTTCCGTGCATGTTGTTTACCCCAATCTGTCCACATTCGCTCTCATTTAGACCAGTCATACTTCCAGACTCTGCACAACTTGAATTGAAGATTCCACAGGACGCAAGAAGCAATGCCTGGGTTTCATTTGATGGAAAGAGAAGGCAGCAACTTTCAAGAGGAGATTCGGTACGAATATCTATGAGTCAGTATCCACTTCCAACAGTTAACAAGTTTGATCAAACAGGTGATTGGTTTCATAGCTTAATTCGCTGCCTAAATTGGAATGAAAGGCTTGATCAAAAGGCTCTATAA 2925 0.4318 MMARTVCTCHMVFSADRITPTVVSVFSGIDNIRLLPFRFQLRRNTHLLTAQLSNSFSNFGFHSHSQCLNSVQSHVPSRLPWMGPFPGDIAEVEAYCRIFRNSESLHSALVDALCNPITVECSVSYEVPSDEKRLLEDKIVSVLGCIVALVNSGRRDLLSGRSSIVTPFRAAEVGAMEDTLPPLALFRSEMKRCCESLHVALENYLVPGDDRNLDVWRKLQRLKNLCYDSGFPRGEDCPCPSLLANWSPVCLYTPIEDMESKESEAAFWTGGQVTEEGLKWLLNKGYKTIIDLREEDVKDSFYQAAVYDAISSGSIELVRIPVKDGTAPTMEQVERFASYVSNCSKRPIYLHSKEGIRRTSAMVSRWKQYITRTTSEFVSNQAVISNVVLSDSTNGSGKMEDSMIAEGSFQEKDTNLLREGATHGSAASFDSCNSLKTNNEKTKSNGGISQLTADSTASSQVTGASGEGSFPSFSSKINPLEAQIPPFDIFSKRDMSTFLGSRKMSKPSYFSYQVKRVECLPESRSFEPKIVGRAKSSNGSASMSNSHSAWTTINGYSEGEMNYRADANISTTVNSDIDNVNTNSQRTGDDKDKARLALRDEDLGLIEGDMCASSTGVVRVQSRKKAEMFLVRTDGYSCTRERVSESSLAFTHPSTQQQMLLWKSTPKTVLVLKKLGDHLMEEAREVASFLYHQEKMNVFVEPDVHDIFASIPGFGFVQTFYSQDTGDLHEKVDFVACLGGDGVILHASNLFRGAVPPVVSFNLGSLGFLTSHNFEDYKQDLQQIIHGNSAQDGVYITLRMRLRCEIFRKGKAAPGKVFDILNEVVVDRGSNPYLSKIECYEHGRLITKVQADGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPQDARSNAWVSFDGKRRQQLSRGDSVRISMSQYPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0749 974 MobiDBLite consensus disorder prediction 428 476 - -
Vra5g0749 974 Hamap NAD kinase [nadK]. 666 965 IPR002504 GO:0003951|GO:0006741
Vra5g0749 974 PANTHER NAD KINASE 29 974 - -
Vra5g0749 974 Pfam ATP-NAD kinase C-terminal domain 821 947 - -
Vra5g0749 974 Gene3D - 801 941 IPR017437 GO:0003951|GO:0019674
Vra5g0749 974 Pfam ATP-NAD kinase N-terminal domain 729 787 IPR002504 GO:0003951|GO:0006741
Vra5g0749 974 Gene3D Protein tyrosine phosphatase superfamily 259 388 IPR029021 -
Vra5g0749 974 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 261 366 IPR029021 -
Vra5g0749 974 PANTHER NAD/NADH KINASE FAMILY PROTEIN 29 974 - -
Vra5g0749 974 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 669 969 IPR016064 -
Vra5g0749 974 Gene3D - 656 966 IPR017438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0749 Vra-Chr5 12766779 12780212 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0749 K00858 - gmx:100796381 1607.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0749 5 12766779 12780212 Vra5g0749 5 12766779 12780212 ECH