Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0742 ATGGCCGCTAGTTGCTCCTACATGGTTTCCACCAAATTGTCCATGTTGGGTTGGAGTGGAGGAAGAAGAGAAGTCAGAAACCGGAGAACAGTTTTGGTCTCAGCCCAACAACAGAGCGATGTTCAGGAAGCAGAGGACGTGAAGGAGAAAGAGCAGGAACAAGTACAAAGTGAGAAACCGAAGCCAAAAGGAACGATACCAAGGCCAGTGGAACCTCAGGTGAATGTGAAGAGCAAAAACATGATAAGGGAATACGGAGGGCAGTGGTTGAGCTGCACCACACGCCATGTCAGGATCTTCGCAGCCTATATCGACCCTGTAACTTTTGAGTTTGATCAAACCCAGATGGATAAGCTCACCCTTATTCTTGATCCTACTGATGAGTTTCTGTGGAACCCTGACACCTGCAACATGGTCTATTCTTACTTCCAGGAACTTGTTGATCACTACGAGGGTGCTCCATTGAACGATTACACCCTTCGTCTGATTGGTTCGGACATAGAGCACTACATAAGAAAGATGTTATACGATGGTCTAATAAAGTATAACATGAATGCAAGGGTTCTGAATTTCAGCATGGGCAAGCCACGGATCATGTTCGACAATGATATCAAACCTGAAGTTTCAATGGAGAAGTGA 639 0.4554 MAASCSYMVSTKLSMLGWSGGRREVRNRRTVLVSAQQQSDVQEAEDVKEKEQEQVQSEKPKPKGTIPRPVEPQVNVKSKNMIREYGGQWLSCTTRHVRIFAAYIDPVTFEFDQTQMDKLTLILDPTDEFLWNPDTCNMVYSYFQELVDHYEGAPLNDYTLRLIGSDIEHYIRKMLYDGLIKYNMNARVLNFSMGKPRIMFDNDIKPEVSMEK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0742 212 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 204 IPR018922 GO:0016655
Vra5g0742 212 MobiDBLite consensus disorder prediction 42 58 - -
Vra5g0742 212 MobiDBLite consensus disorder prediction 33 73 - -
Vra5g0742 212 Coils Coil 34 54 - -
Vra5g0742 212 Pfam Cyanobacterial and plastid NDH-1 subunit M 90 198 IPR018922 GO:0016655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0742 - - gmx:100527195 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0742 5 12666444 12667638 Vra5g0742 5 12666444 12667638 ECH