Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0721 ATGGTACTTTCTTCTAGTGGACTTACTACTACACAGCCACTTTTTTCTTTTGGATTGATTTCGGATGTGCAATATGCTGATATTCCTGATGGTCGCTCATTCCTTGGTGTTCCACGATATTATAGGCACAGTATTCTTGTGTTGCAGAGAGCAGTTAAAGAATGGAACACTCACCAGAAGCATAAGTTTGTGATCAATTTTGGAGATATTGTTGATGGATTTTGTCCCAAAGATCAATCTCTTGGTGCTGTACAGAAAGTTGTGGACGAATTTGAGATGTTCAGGGGAGGACCTGTGTATCATATGATTGGCAATCACTGCCTATACAATCTCCCTCGCAGCAAGTTACTTCCATTATTGAAGATCCAAAGTCTTGATGGCCGTGCATACTATGATTTCTCACCAGTGCCTGAGTATAGGTTCGTAGTTCTAGATGGTTATGACATCAGTGCCATTGGTTGGCCCCAAGACCACCCAAAATCATTGGAGGCCATGAAAATCCTAAGGGAGAAGAACCCAAATGAAAATAAAAATAGTCCAACGGGTATGGAGGGGCTTGAAAGAAGGTTTCTCATGTTCAATGGAGGCATTGGAAGGGAACAGATGGAATGGTTGGATGGTGTTCTACTGGAAGCAACAAAAAAGAAGCAGAAGGTGGTTGTTTGTTGCCATCTGCCTTTAGATGCAGGTGCAGCAAGTGAGAAGGGACTGTTATGGAATTATGATGAAGTAATGAATTTGATACATAGATACAACTGTGTTAAGGTATGTCTTGCTGGACATTATCATAAAGGAGGATACTCTATTGATTCTCATGGGATACACCATAGAATTATTGAAGCCGCTTTGGAATGTCCTCTTGATACAAATGCATTTGGACACATTGATGCCTATCATGACAGATTATCTCTTGTTGGAACTGACAGAATGAAAAGTACAGACATGCATTTTTATCCTACAAGTTAG 966 0.4048 MVLSSSGLTTTQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQRAVKEWNTHQKHKFVINFGDIVDGFCPKDQSLGAVQKVVDEFEMFRGGPVYHMIGNHCLYNLPRSKLLPLLKIQSLDGRAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPKSLEAMKILREKNPNENKNSPTGMEGLERRFLMFNGGIGREQMEWLDGVLLEATKKKQKVVVCCHLPLDAGAASEKGLLWNYDEVMNLIHRYNCVKVCLAGHYHKGGYSIDSHGIHHRIIEAALECPLDTNAFGHIDAYHDRLSLVGTDRMKSTDMHFYPTS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0721 321 SUPERFAMILY Metallo-dependent phosphatases 13 312 IPR029052 -
Vra5g0721 321 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 3 320 - -
Vra5g0721 321 Gene3D - 10 310 IPR029052 -
Vra5g0721 321 Pfam Calcineurin-like phosphoesterase 16 264 IPR004843 GO:0016787
Vra5g0721 321 PANTHER - 3 320 - -
Vra5g0721 321 CDD MPP_Nbla03831 15 304 IPR041869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0721 Vra-Chr5 11723639 11726099 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0721 K01517 - gmx:100815255 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0721 5 11723639 11726099 Vra5g0721 5 11723639 11726099 ECH