Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0715 ATGATCACAGTCCTATTTATCTTGATTTGTGTTGGATTCAGCGATGGTGCCAACATGACACCGTCTGAGGGGAGAAGAGGGCAGTGGCAACTGCTGCTTAACAGCACTGGCGTGGTTGGCATGCATCTGGCCTTAACCTACAAAAACACAGTCGTAATGTTCGATCAAACTGGAGCTGGCCCTTCTGGTTACAAACTTCGCAGACGCTTCCATGGAAGCACGTGCAGCAGAAGCAGGCATGATATGATGGACTCCACATGCTATGCTCATTCTGTAGAGTATGACATTAGTACCAATAAAGTGAGGCCTCTGTGGCTTGATACTGATCCCTGGTGTTCCTCTGGTTCATTCCTGAGCAATGGTACTCTTTTACAAGTAGGCGGAAATGAAAGAGGTGCTAAACGTGTCAGATTCTTTAGGCCCTGTGGGAATGACCAATGTAACTGGATACAATCAAAGAAAACGCTATCTGATATGAGGTGGTATGCTTCTAGTCAGCTGCTACCAGAACATGATAGGGTGGTGGTTGTTGGTGGAAGAAGAACTTTCACATATGAATTTGTACCAAAAATTAGTCCTGGAGAAAAATCCTTTGACCTTCCATTCTTGCACCAAACCAATGACAGGAATGAAGGAGGGAACAACCTATACCCCTTTCTCCACCTTTCATCAGACGGAAACTTGTTCATTTTCGCCAACCGCGATTCCATCCTACTCAACTTGAGAAGAAACAGAGTGATCAAGACCTTCCCTCGGATTCCAGGAGAAGGGTCGAGAAACTATCCAAGCTCAGGCTCATCTGTGATACTCCCATTGGACCACAGAGACAACTTCCAAAAGGTGGAAGTTATGGTGTGTGGTGGTTCATCCACTGGAGCCTTTACAGCTGCCGCTAGGCGTAGATTCTTGGAAGGGTTAAGATCATGTGGAAGAATGGTGATCACAGGAGAGAAGAACAAGTGGAATATGGAGCAGATGCCGAAGCCACGTCTCTTAAATGACATGGTGATTCTCCCTATAGGTGACATCCTAATCATAAATGGTGCTGAACGAGGGTCTGCGGGATATGACAATGCTAGAAACGCTTCTCTTGAACCTTTTCTCTATAGCCCTAAAAAAAGACTTGGAGCAAGGTTCAGAGTCCTTATGTCCACCAAGATAGCAAGAATGTATCACTCATCGGCAACTCTTCTTCCTGATGGGAGGGTCTTGGTTGCGGGTAGTAACCCTCATGGGAGGTACATTTTTCACAATGTGGCATACCCAACTGAACTAAGACTTCAAGCATTTGTTCCACACTATATGGAAAGGAGGTACCATAGCTTGAGGCCTAATAACTTGACCATAGAATATGGTGGTGCCAGCCATGCAATTGAGTATGGGAAAGAGTTTAGAGTTAGGTTCTTCCTAATGAGGAGGCCTAACAACGAGATGGTGTTCAGTGCCTATGCACCACCATTTACCACTCATTCTTTTGCCATGAATCAGAGGATGCTGAAGCTGAGGTGCAGGAGCTTGGAGAGAAGTGGTGATGGGTGGGTGGTTGCAGTCTTGGAAGCCCCACCATCATCCCTTGTTGCACCTTCTGGTTACTACATGCTCACGGTTGTCAATGGTGGAATTCCAAGCATGTCTCAGTGGGTTCACTTTGGACACGCCTAA 1662 0.4615 MITVLFILICVGFSDGANMTPSEGRRGQWQLLLNSTGVVGMHLALTYKNTVVMFDQTGAGPSGYKLRRRFHGSTCSRSRHDMMDSTCYAHSVEYDISTNKVRPLWLDTDPWCSSGSFLSNGTLLQVGGNERGAKRVRFFRPCGNDQCNWIQSKKTLSDMRWYASSQLLPEHDRVVVVGGRRTFTYEFVPKISPGEKSFDLPFLHQTNDRNEGGNNLYPFLHLSSDGNLFIFANRDSILLNLRRNRVIKTFPRIPGEGSRNYPSSGSSVILPLDHRDNFQKVEVMVCGGSSTGAFTAAARRRFLEGLRSCGRMVITGEKNKWNMEQMPKPRLLNDMVILPIGDILIINGAERGSAGYDNARNASLEPFLYSPKKRLGARFRVLMSTKIARMYHSSATLLPDGRVLVAGSNPHGRYIFHNVAYPTELRLQAFVPHYMERRYHSLRPNNLTIEYGGASHAIEYGKEFRVRFFLMRRPNNEMVFSAYAPPFTTHSFAMNQRMLKLRCRSLERSGDGWVVAVLEAPPSSLVAPSGYYMLTVVNGGIPSMSQWVHFGHA* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0715 553 Pfam Galactose oxidase-like, Early set domain 455 549 IPR015202 -
Vra5g0715 553 PANTHER SECRETED PROTEIN-RELATED 13 552 - -
Vra5g0715 553 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 13 552 - -
Vra5g0715 553 SUPERFAMILY Galactose oxidase, central domain 92 435 IPR011043 -
Vra5g0715 553 Gene3D - 23 441 IPR037293 -
Vra5g0715 553 SUPERFAMILY E set domains 441 550 IPR014756 -
Vra5g0715 553 Pfam Glyoxal oxidase N-terminus 41 288 IPR009880 -
Vra5g0715 553 CDD E_set_GO_C 458 549 IPR015202 -
Vra5g0715 553 Gene3D Immunoglobulins 448 552 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0715 Vra-Chr5 11609138 11611058 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0715 - - gmx:100814200 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0715 5 11609138 11611058 Vra5g0715 5 11609138 11611058 ECH