Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0714 ATGACTGTCACGGTGGCGCCAACGGTGAAGGACGGGTGTCTTACGGTGAGGGGAAAGACCGTTTTGTCCCATGTCCCCGGAAACGTTGTTGTTTCTCCGGTTGGAACAGAGTCCGCGTTCTTGGGTGCAACTTTAACCGTTTCAAGTTCTCGTCATGTTTTTGATCTTGGAATTCTTCAGGGATATAAGTTGCTATCTTTGTTCAGAGTCAAAATCTGGTGGATGATACCGCGTCTAGGGAGATCTGCCAGCGATGTTCCAATGGAAACTCAATTGCTGCTCTTGCTAGCAAATGAAGAATCTGAACTTGAGGATGAGCCTTCTTCTGACTGTGAAGAGCCAGCTACGGATAACAATTGCTACATTCTCTTCTTGCCTGTTTTGGATGGACAGTTTCGCGCAACTTTACAAGGAACTCAATCGAATCATCTCCAGTTTTGCATTGAAAGTGGAGATGCCAATGTTCAAACTTCCCAATCACTAGAAGCAGTATTTGTAAATTCAGGGGACAATCCATTTGAGTTAATCAGGGATTCAATCAAGATATTGGAGAAACACAAAGGGACTTTCTGTCATCTTGAAAACAAGAGGATCCCTGCACATCTTGACTGGTTTGGATGGTGCACTTGGGATGCTTTTTACACTCAAGTGAATCCACAAGGAATAAAGGAAGGCCTTCAAAGTTTCTCAGATGGAGGTTGTTCGCCAAAGTTTATCATCATTGATGATGGATGGCAAGAGATCCTCAATACGTTTCACAAAGAAGGTGAAGCAGTGATCGAGGGAACCCAGTTCGCAAGTAGACTAGCAGACATCAAAGAAAACAAAAAGTTCATCAATTCAGACTCTGACAATTCTTGCAGCAATCTCCACGATTTTGTTGACTATATCAAACATAATATGAATGTAAAATACGTTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGTGTACTTCCATCATCAAATACAATGAAGAAATATAATCCAAAGCTTGCATATCCAATTCAGTCACCTGGTGCCACAGGGAACCTTAGAGATATAGCCATGGACAGCCTGGAAAAATATGGAGTAGGAATCATTGACCCAGAAAATCTCTATGACTTTTACAATGACTATCACGGTTACCTTGTCAGCTGTGGTGTGGATGGAGTCAAAGTAGACGTCCAAAATTTGATAGAAACGTTGGGTTCTGGGTACGGTGGTCGTGTTTCATTGACCAAACGGTATCAAGAAGCATTAGAGGAGTCTGTAACAAGGAACTTTAAGGATAACAACCTTATTTGCTGCATGTGTCACAACTCGGATTCAATATACAGTTCAAAGAAGAGCGCAGCAGCAAGAGCATCTGAGGATTTCATGCCAAGAGAACCAACATATCAAACCTTACACGTTGCCTCTGTCGCGTTTAACAGCCTTCTTCTGGGAGAGATATTTGTGCCAGACTGGGACATGTTCCATAGCAAGCACGAGACAGCGGAGTTCCATGCTGCAGCAAGAGCGATTGGTGGCTGTGCAGTATATGTAAGTGACAAACCTGGCAATCATGATTTTAAAATCCTCAAAAAGCTAGTGCTACCTAATGGGTCCGTCTTGAGAGCAAGGTTTGCTGGCCGTCCTACTCGAGATTGTTTATTTGAAGACCCAGTGATGGATGGTAAGAGTTTGCTGAAAATTTGGAACTTGAATGCACTGACCGGGGTGGTAGGCGTCTTCAATTGCCAAGGAGCAGGAAGCTGGCCACTGAAATCGCTGGAAGCCGCACCTTTTCACATAACCATTTCAGGGAAAGTGAGACCTCTTGACGTTGAATTTCTTGAAGAAGTTGCAGGAGACAATTGGAGTGGAAATTGCATAGTATATGCCTTCAATGCAGGCTTGCTTTCCATGGTTTCTCTGAGAGGAAAACTTGAAGTGTCCCTGGATACACTTCAATGTGAAATATATACAGTATCTCCAATAAGGGTGTTTGGTCATAATGTGCACTTTGCACCAATAGGATTGCTTGACATGTACAATTCGGGAGGAGCAGTAGAGGCCTTGCACTGCAACATGGATGTTGCAGAGTGCATAATAAAAGTCAAAGGCAGAGGTGGTGGCCGTTTTGGAGCCTACTCCAACGTTAGACCAAAGCTTTGTGTAGTGGACATGAAGGAGGAGGAGTTTTCCTACAACCCTGAAGATGGATTATTGACGTTTAAGCTTGATGGTGAAGGCAATTCAAGGGATATAGAATTTGTATACTGA 2250 0.4333 MTVTVAPTVKDGCLTVRGKTVLSHVPGNVVVSPVGTESAFLGATLTVSSSRHVFDLGILQGYKLLSLFRVKIWWMIPRLGRSASDVPMETQLLLLLANEESELEDEPSSDCEEPATDNNCYILFLPVLDGQFRATLQGTQSNHLQFCIESGDANVQTSQSLEAVFVNSGDNPFELIRDSIKILEKHKGTFCHLENKRIPAHLDWFGWCTWDAFYTQVNPQGIKEGLQSFSDGGCSPKFIIIDDGWQEILNTFHKEGEAVIEGTQFASRLADIKENKKFINSDSDNSCSNLHDFVDYIKHNMNVKYVYMWHALAGYWGGVLPSSNTMKKYNPKLAYPIQSPGATGNLRDIAMDSLEKYGVGIIDPENLYDFYNDYHGYLVSCGVDGVKVDVQNLIETLGSGYGGRVSLTKRYQEALEESVTRNFKDNNLICCMCHNSDSIYSSKKSAAARASEDFMPREPTYQTLHVASVAFNSLLLGEIFVPDWDMFHSKHETAEFHAAARAIGGCAVYVSDKPGNHDFKILKKLVLPNGSVLRARFAGRPTRDCLFEDPVMDGKSLLKIWNLNALTGVVGVFNCQGAGSWPLKSLEAAPFHITISGKVRPLDVEFLEEVAGDNWSGNCIVYAFNAGLLSMVSLRGKLEVSLDTLQCEIYTVSPIRVFGHNVHFAPIGLLDMYNSGGAVEALHCNMDVAECIIKVKGRGGGRFGAYSNVRPKLCVVDMKEEEFSYNPEDGLLTFKLDGEGNSRDIEFVY* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0714 749 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 749 - -
Vra5g0714 749 Gene3D Aldolase class I 200 527 IPR013785 -
Vra5g0714 749 PANTHER - 1 749 IPR008811 -
Vra5g0714 749 SUPERFAMILY (Trans)glycosidases 200 533 IPR017853 -
Vra5g0714 749 Pfam Raffinose synthase or seed imbibition protein Sip1 9 735 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0714 Vra-Chr5 11593572 11597629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0714 1 736 Glycoside Hydrolase AT1G55740 48.138 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0714 - - gmx:100816978 1328.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0714 5 11593572 11597629 Vra5g0714 5 11593572 11597629 ECH