Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0703 ATGGCTGCCACTGGAGGTGGTGAGGCTCACAACAACCCTGCTCTTCAACCGGATTTGGATATTCCGGACACTCCGGATCTCCAGTTCGCTGAGTTCGGATCGGGTTGTTTCTGGGGAGCGGAGTTGGCCTTTCAGCGAATTGTGGGAGTGGTAAAAACCGAGGTCGGATATACTCAGGGCCACACACCTGACCCAGATTACAAACTGGTTTGCACCGGAACCACTAACCATGTTGAAGTGGTTCGGGTTCAGTTCGACCCGAAGGTTTCCCCCTACACGGATCTGCTTGCTCTGTTTTGGTCTCGACATGACCCAACTTCCATCAACCGCCAGGGCAATGATGTGGGTGCACAGTATAGATCAGGAATATACTACTACGACGAAGAGCAGGCTCGTTTAGCCCAGGAATCGAAAGAAGCAAAACAGTTGGAGTTGAAGGAGAAGATTGTGACAGAAATTCTTCCAGCTAAGAGGTTTTACAAAGCAGAGGACTACCATCAGCAATATCTGGAGAAGGGTGGAGGAAAAGGTGAAAGCAACAAACAGTCAGCAGAAAAAGGTTGCACTGATCCCATCAGGTGCTATGGCTGA 591 0.4992 MAATGGGEAHNNPALQPDLDIPDTPDLQFAEFGSGCFWGAELAFQRIVGVVKTEVGYTQGHTPDPDYKLVCTGTTNHVEVVRVQFDPKVSPYTDLLALFWSRHDPTSINRQGNDVGAQYRSGIYYYDEEQARLAQESKEAKQLELKEKIVTEILPAKRFYKAEDYHQQYLEKGGGKGESNKQSAEKGCTDPIRCYG* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0703 196 MobiDBLite consensus disorder prediction 171 196 - -
Vra5g0703 196 MobiDBLite consensus disorder prediction 1 20 - -
Vra5g0703 196 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 9 196 - -
Vra5g0703 196 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 30 172 IPR002569 GO:0008113
Vra5g0703 196 Coils Coil 126 146 - -
Vra5g0703 196 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Vra5g0703 196 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 9 196 - -
Vra5g0703 196 Pfam Peptide methionine sulfoxide reductase 31 173 IPR002569 GO:0008113
Vra5g0703 196 Gene3D Peptide methionine sulphoxide reductase MsrA 17 196 IPR036509 GO:0008113
Vra5g0703 196 SUPERFAMILY Peptide methionine sulfoxide reductase 23 174 IPR036509 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0703 Vra-Chr5 11391346 11392450 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0703 K07304 - gmx:100527085 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0703 5 11391346 11392450 Vra5g0703 5 11391346 11392450 ECH