Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0696 ATGGCGGAGAAGTTTGGAGTAGCTGCAGTAGCAGAAGAGAGCTCTAACTCCAGGGTTCCTCACCATACGACAGCGAAGCTCGTCGTTTTGGCCGACCTCAACGTTGATCCTCCCGAAGCCGACGACGACGACTCTTCCCTTGTCCCTCCTCCGTCGATTGCAACTTTGGCGAATGATGAAAGTGGTCAAGATAAGAGTTTGCTGTCCAAAGACACTGATAGCATTGAAGGTGAAAGTAAAAAGTTGAACAAACTGGGCAGATGTCGTTCCAGACTTAGCAAGACAGAGTCTTCTCTTGATTGTGGAGCTGATGCAGATGGTGATCCACATGTTCAAGGACCTCCTTCATCTCGGGAGGAAAAAGTTAGCAGTGTGAAGACTGGCTTGGTTCATGTTGCAAAGAAGATGCCAAAAAATGCTCATGCTCATTTTATACTTGGCCTGATGTACCAAAGATTAAGCCAGCCTCAAAAGGCTGTGTTGGCTTATGAGAAGGCAGAACAGATCTTGCTCAGGCCTGAGGCTGAGATTGATAGGCCAGAGTTGCTTTCATTAGTTCAGATTCACCATGCACAGTGCCTGTTACTAGAAAGTTCATCAGAAAGTAGTTCTGATAAAGAACTTGAGCCTCATGAACTTGAGGAGATTCTGTCTAAGCTGAAAGAGTCAGTGCAGTCAGATGTTAGACAGACAGCTGTATGGAACACACTGGGTTTTATCCTTCTTAAAACTGGTCGCGTGCAGAGTGCTATCTCAGTTTTGTCATCATTGTTGTCCATTGCACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTTATCTTCAAATTGGGAATTTGGAATTATCTGCAAAATGTTTCCAGCAATTGATTTTAAAAGATCAAAATCATCCTGCAGCTTTGGTCAACTATGCTGCCCTTCTCTTGGGTAAATATGCTTCAGTTGTGGCAGGTCCAGGTGCAAGTGCCTCTGAAGGTGCCATGGCTGATCAGATCGTGGCTGCAAAAGTTGCCAAGGAATGTTTGTTGGCTGCAATTAAAGCAGATAGCAAATCAGCCCATCTATGGGCAAATCTTGCATATGCATTTTCTATAAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCTGCCAAACTGGAGCCCAATTGCATGTCTACTCGATATGCTGTTGCTATCCATCGAATAAAGGAGGCAGAAAGATCACAAGATCGCAGTGAACTGCTTTCATGCGCTGGAAATGAAATGGCTTCTATAATAAGAGATGGTGATTCATCCCTGGTCGAGATTCCAATAGCATGGGCTGGACTTGCCATGGTTCACAAGGCTCAGCATGAGATAGTGGCAGCATATGAAAGTGAACAGCATGGGTTAAGAGAGGTTGAAGAGCGTGCTCTTTGCAGTTTAAAGCAGGCTGTAGCAGAAGATCCAAATGATGCGGTGCAGTGGCATCAACTCGGCGTTCATAGTCTCTGTGCTAGGCAATTCAAAACATCACAAAAGTACTTCAAAGCTGCTGTTGCCTGTGACAGGGATTGCAGCTATGCGTGGTCTAACCTAGGTGTCTCACTTCAACTATCAGAGGAACCATCACAAGCTGAAGAAGTATACAAGAAAGCATTGTCTTTGGCAACAACTGAACAAGCGCATGCTATATTATCTAATTTGGGAATTCTGTACCGCCATCAGAAACAATATCAACGTGCGAAGGCCATGTTTACGAAGTCACTTGAACTTCAGTCTGGGTATGCTCCTGCATTCAACAATCTGGGTCTTGTGTTTGTTGCTGAGGGTCTTTTGGAAGAAGCCAAGTATTGTTTCAACAAAGCTCTCCAATCAGATCCTTTGCTAGATGCAGCTAAATCTAATATGATTAAGGCAGTTGTCATGTCAAAGTTATGCAAAGGCCTCACCTCATGCGCTCTTAAAGAGTGA 1944 0.4455 MAEKFGVAAVAEESSNSRVPHHTTAKLVVLADLNVDPPEADDDDSSLVPPPSIATLANDESGQDKSLLSKDTDSIEGESKKLNKLGRCRSRLSKTESSLDCGADADGDPHVQGPPSSREEKVSSVKTGLVHVAKKMPKNAHAHFILGLMYQRLSQPQKAVLAYEKAEQILLRPEAEIDRPELLSLVQIHHAQCLLLESSSESSSDKELEPHELEEILSKLKESVQSDVRQTAVWNTLGFILLKTGRVQSAISVLSSLLSIAPENYDCLGNLGIAYLQIGNLELSAKCFQQLILKDQNHPAALVNYAALLLGKYASVVAGPGASASEGAMADQIVAAKVAKECLLAAIKADSKSAHLWANLAYAFSISGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDRSELLSCAGNEMASIIRDGDSSLVEIPIAWAGLAMVHKAQHEIVAAYESEQHGLREVEERALCSLKQAVAEDPNDAVQWHQLGVHSLCARQFKTSQKYFKAAVACDRDCSYAWSNLGVSLQLSEEPSQAEEVYKKALSLATTEQAHAILSNLGILYRHQKQYQRAKAMFTKSLELQSGYAPAFNNLGLVFVAEGLLEEAKYCFNKALQSDPLLDAAKSNMIKAVVMSKLCKGLTSCALKE* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0696 647 SUPERFAMILY TPR-like 133 309 IPR011990 GO:0005515
Vra5g0696 647 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 15 644 - -
Vra5g0696 647 SUPERFAMILY TPR-like 339 398 IPR011990 GO:0005515
Vra5g0696 647 MobiDBLite consensus disorder prediction 96 124 - -
Vra5g0696 647 Gene3D Tetratricopeptide repeat domain 336 420 IPR011990 GO:0005515
Vra5g0696 647 Gene3D Tetratricopeptide repeat domain 466 551 IPR011990 GO:0005515
Vra5g0696 647 Pfam Tetratricopeptide repeat 354 387 IPR019734 GO:0005515
Vra5g0696 647 Pfam Tetratricopeptide repeat 587 618 IPR019734 GO:0005515
Vra5g0696 647 ProSiteProfiles TPR repeat profile. 517 550 IPR019734 GO:0005515
Vra5g0696 647 MobiDBLite consensus disorder prediction 1 23 - -
Vra5g0696 647 Gene3D Tetratricopeptide repeat domain 67 318 IPR011990 GO:0005515
Vra5g0696 647 Gene3D Tetratricopeptide repeat domain 552 639 IPR011990 GO:0005515
Vra5g0696 647 SUPERFAMILY TPR-like 466 618 IPR011990 GO:0005515
Vra5g0696 647 SMART tpr_5 587 620 IPR019734 GO:0005515
Vra5g0696 647 SMART tpr_5 354 387 IPR019734 GO:0005515
Vra5g0696 647 SMART tpr_5 140 173 IPR019734 GO:0005515
Vra5g0696 647 SMART tpr_5 553 586 IPR019734 GO:0005515
Vra5g0696 647 SMART tpr_5 265 298 IPR019734 GO:0005515
Vra5g0696 647 SMART tpr_5 517 550 IPR019734 GO:0005515
Vra5g0696 647 SMART tpr_5 231 264 IPR019734 GO:0005515
Vra5g0696 647 SMART tpr_5 434 467 IPR019734 GO:0005515
Vra5g0696 647 SMART tpr_5 483 516 IPR019734 GO:0005515
Vra5g0696 647 Pfam Tetratricopeptide repeat 519 582 - -
Vra5g0696 647 ProSiteProfiles TPR repeat profile. 231 264 IPR019734 GO:0005515
Vra5g0696 647 MobiDBLite consensus disorder prediction 35 76 - -
Vra5g0696 647 Pfam Tetratricopeptide repeat 241 300 - -
Vra5g0696 647 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 15 644 - -
Vra5g0696 647 ProSiteProfiles TPR repeat profile. 587 620 IPR019734 GO:0005515
Vra5g0696 647 ProSiteProfiles TPR repeat profile. 354 387 IPR019734 GO:0005515
Vra5g0696 647 ProSiteProfiles TPR repeat profile. 553 586 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0696 433 619 Glycosyltransferase AT3G04240 25.532 1.80e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0696 - - gmx:100820184 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0696 5 11161535 11168524 Vra5g0696 5 11161535 11168524 ECH