Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0695 ATGGCAGCTGCAAGTGGCATCATCTCCTTCTCCTCTGCGTCATTCTTCACTCCAACAACACCTCAACCAAAAACCCATTGCCTCCTCAAACACACGAAGGATAATGATCATCTTCCAACATCATCATCCTTCACTACTCTTTCTTCTCTTAGGATATCAAAACCAACAACCACCTTTGGAGTCACTTCAACCACAAGGGTCCATGTTCCTCCTCGTAGGTTGAGTTGTTCGGCCTCTGCATCTTCCTCTTCCACTCTTCCCTCGGCTCTTCTATTTGACTGCGATGGAGTCCTTGTAGATACTGAAAAAGATGGTCACCGCATTTCTTTCAACCAAACCTTCCAAGAGAGAAATCTGGGCGTTACATGGGATGTAGACTTGTATGGAGAATTGCTCAAAATTGGAGGTGGAAAAGAAAGGATGACAGCATACTTTAACAAGACAGGTTGGCCTGCGAATGCCCCAGCAGGTGAACAAGAAAGAAAAGATTTCGTTGCTTCACTTCACAAACAGAAGACAGAACTATTCATGGCTCTTATTGAGAAAAAACTGTTGCCTCTTCGTCCAGGTGTTGCAAAGATTATCGATCAGGCTTTTTCTCAAGGAGTCCAAGTTGCAGTTTGCAGCACTTCCAATGAAAAGGCGGTCTCTGCAATAGTATCATTCTTGCTGGGACCTGAGAGAGCAGAAAAAATCAAGATATTTGCAGGAGATGTGGTTCCCCGTAAAAAGCCTGATCCAGCCATCTATCTGTTAGCAGCCAGCACTCTGGGTATTGAACCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTAGCAGCTGCTAAAGCAGCTGGAATGACATGTATAGTAACAAAGAGCGGCTACACAGAAGATGAAGATTTCTTAAATGCAGATGCAGTGTTTGATAGCATTGGTGATCCTCCTGAGGAGAGATTTGATTTGGCATTCTGTGGTAGCCTTCTTGAGAAGCAATATGTGAGCTAG 993 0.4461 MAAASGIISFSSASFFTPTTPQPKTHCLLKHTKDNDHLPTSSSFTTLSSLRISKPTTTFGVTSTTRVHVPPRRLSCSASASSSSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQERNLGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPANAPAGEQERKDFVASLHKQKTELFMALIEKKLLPLRPGVAKIIDQAFSQGVQVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLGIEPSRCVVVEDSAIGLAAAKAAGMTCIVTKSGYTEDEDFLNADAVFDSIGDPPEERFDLAFCGSLLEKQYVS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0695 330 PANTHER CBBY-LIKE PROTEIN 58 329 - -
Vra5g0695 330 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 58 329 IPR044999 GO:0016787
Vra5g0695 330 CDD HAD_CbbY-like 92 289 - -
Vra5g0695 330 SFLD Haloacid Dehalogenase 85 313 - -
Vra5g0695 330 Pfam Haloacid dehalogenase-like hydrolase 90 286 IPR041492 -
Vra5g0695 330 Gene3D Putative phosphatase; domain 2 101 185 IPR023198 -
Vra5g0695 330 SFLD phosphoglycolate phosphatase 85 313 - -
Vra5g0695 330 Gene3D - 89 306 IPR023214 -
Vra5g0695 330 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 170 286 IPR006439 -
Vra5g0695 330 SUPERFAMILY HAD-like 88 309 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0695 Vra-Chr5 11157242 11160874 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0695 - - pvu:PHAVU_009G169900g 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0695 5 11157242 11160874 Vra5g0695 5 11157242 11160874 ECH