Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0694 ATGAAACGGTTTTTCAAAGTAGTGGAGAAAGATTCAGATGGGTCTGCGAAGAAGCCAAGAGAGACTGAGAATGATGCCGAAAATGAAGAGAACAAGAAGAAGGAACCGTTGAAGTTTATGACATGGAATGCCAACAGCTTTCTTCTTCGGGTCAAAAACAACTGGCCCGACTTCACCAACCTTATCACCACTTTTGATCCTGATGTCATTGCCATTCAGGAAGTTCGGATGCCTGCTGCAGGAGCAAAGGGTGCATCTAAAGTTCCGGGGGAAATAAAAGATGATACAAGCGCAGCCAGAGAAGAAAAAAAGGTATTGATGCGTGCACTCTCTGCTCCACCTTTTGGAAACTATCATGTTTGGTGGTCTCTTGCAGATTCAAAGTATGCAGGGACAGCATTACTTGTGAAAAAATGCTTCAAGCCAAAAAGTGTTGTTTTCAATCTTGATAAATTAGCTTCAAAACATGAACCAGATGGTCGAGTGGTCCTAGTTGAATTTGAAACACTCCGTTTATTGAATACGTATGTACCAAACAACGGATGGAAAGAGGAGGCAAACTCGTTTCAAAGGAGAAGAAAATGGGACAAAAGGATTCTTGAATTCGTTACACAAAATTCAGACAAGCCTTTAATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATTGACGTAAGTCATCCCGAGTTTTTCAGTGCGGCAAAACTCAACGGTTATATCCCTCCAAATAAAGAGGATTGTGGCCAACCTGGGTTTACCTTGGCTGAAAGAAGACGATTTGGTACCATCTTAAGAGAGGGAAAGCTGGTGGATGCTTATAGATTTCTGCACAAGGATAAGGACATGGAACGAGGTTTCTCATGGTCTGGAAATCCAGTTGGAAGGTATCGTGGAAAACGGATGAGAATAGACTATTTTTTAGTTTCAGAGAGCCTTAAAGAAAGGATTGTTGCATGTGAAATACATGGACATGGGATAGAATTAGAAGGTTTCTATGGAAGTGATCATTGTCCCGTTACCTTAGAGCTCTCTCCTAGTTCTGACCCTCAAAATGAGGATGCAACAAAGCAACTGTCCTAA 1083 0.4183 MKRFFKVVEKDSDGSAKKPRETENDAENEENKKKEPLKFMTWNANSFLLRVKNNWPDFTNLITTFDPDVIAIQEVRMPAAGAKGASKVPGEIKDDTSAAREEKKVLMRALSAPPFGNYHVWWSLADSKYAGTALLVKKCFKPKSVVFNLDKLASKHEPDGRVVLVEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKLNGYIPPNKEDCGQPGFTLAERRRFGTILREGKLVDAYRFLHKDKDMERGFSWSGNPVGRYRGKRMRIDYFLVSESLKERIVACEIHGHGIELEGFYGSDHCPVTLELSPSSDPQNEDATKQLS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0694 360 Pfam Endonuclease/Exonuclease/phosphatase family 40 337 IPR005135 GO:0003824
Vra5g0694 360 TIGRFAM xth: exodeoxyribonuclease III (xth) 37 344 IPR004808 GO:0004518|GO:0006281
Vra5g0694 360 PANTHER AP ENDONUCLEASE 24 348 IPR004808 GO:0004518|GO:0006281
Vra5g0694 360 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 24 348 - -
Vra5g0694 360 ProSiteProfiles AP endonucleases family 1 profile. 37 346 IPR004808 GO:0004518|GO:0006281
Vra5g0694 360 MobiDBLite consensus disorder prediction 1 33 - -
Vra5g0694 360 CDD Ape1-like_AP-endo 37 344 - -
Vra5g0694 360 Gene3D Endonuclease/exonuclease/phosphatase 5 346 IPR036691 -
Vra5g0694 360 SUPERFAMILY DNase I-like 37 344 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0694 Vra-Chr5 11143792 11149840 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0694 - - gmx:100817167 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0694 5 11143792 11149840 Vra5g0694 5 11143792 11149840 ECH