Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0687 ATGGTTAGGGCTCGTGAGAACTGGGAGAAGCTGGTTCGAGCGACACTGAAGAGGGAGCAACTAAGGAATGCAGGCCAAGGACACGCCAGAGTTCCCAGCGGAATCGCCGGCGCGGTTCCTCCGTCCCTCGCGGAAACCACAAACATTGATTTGATCTTGCAGGCCGCCGATGAAATTCAATCGGAGGATCCTAACGTTGCTAGGATCTTGTGCGAGCAGGCATATAGTATGGCTCAAAATCTGGATCCCAACAGTCATGGTAGGGGAGTTTTACAATTCAAGACTGGTTTAACGTCTGTAATCAAGCAAAAACTTGCTAAGAAGGATGGGGTTCGGATTGATCGCAATCGTGACTTGGAAAACCTTTGGAAGTTTTATCTTCACTACAAGCAACGTCATAGAGTGGATGACATTCAACGAGAAGAACAGAGATTGCAAGAATCTGGAACTTTTAGCTCCTCATTGGGAGAGTTGAAGCTTAGATCATCAGAAATGAGAAAGATCATTGCTACGCTACGGGCTTTAGTGGAAGTCCTGGAGGCACTTAGTAAGGATGCTGATCCCAACGGAGTTGGAGGACTCGTAGTGGAGGAGTTGAGAAAATTAAAGAAGTCAAGTGTGACATTATCTGGAGAGCTTACACCATACAATATTATTCCTCTGGAAGCACCATCATTAACCAATCCTATCAGAATTTTCCCTGAAGTTAAAGCAGCAATATCTGCAATTAGGTATACTGATCAGTTACCTAGACTTCCTGCTGGATTTAAAATATCTGGACAAAGGGATGCAGACTTGTTCGATCTTCTAGAATTTGTGTTTGGTTTTCAGAAAGACAATGTAAGGAACCAGCGTGAAAATGTTATCTTGATGATAGCAAATAAGCAGTCTAGACTTGGAATACCTGCTGAAACTGATCCAAAAATAGATGAGAAAACAATCAATGAAGTATTCTTGAAGGTGCTAGATAACTATATCAGGTGGTGCAGATACTTGAGAATTCGTCTTGCTTGGAATAGTTTAGAGGCTATTAACCGGGATAGGAAGCTTTCTTTGGTTTCCTTGTATTTTCTTATTTGGGGTGAAGCTGCAAATGTCCGTTTTCTTCCTGAGTGTATATGCTTTATATTCCACAATATGGCCAAAGAGTTGGATGCTATTTTGGATCATCCAGAAGCTGCACCTGCAGTCAGCTGTGTAACTGATGACGGTTCTGCAAAGTTCCTTGAGAAAATAATTTGTCCCATATATGACACGCTAGCTGCAGAAGCTAGTAGAAACAACAATGGGAAAGCTGCACATTCAGCATGGAGGAATTATGATGACTTCAATGAATACTTTTGGTCACCTGCTTGTTTTGAATTAAATTGGCCAATGAGACCTGATTCTCCATTCTTGCGGAAACCTACACCTTCAAAAAGGTCAAAAAGGACTGGTAAAAGCAGTTTTGTTGAGCATAGGACATTTCTTCACCTGTATCGAAGCTTTCATCGACTTTGGATCTTCTTGGCACTAATGTTTCAGGCTTTGACTATCATTGCTTTCAATCATGGACATATCGATGTGGATACTTTTAAAAAAATACTTAGCATTGGGCCATCATTTGCTATCATGAATTTTTCCAAAAGTTTCTTAGATGTGTTACTTACATTTGGGGCATACACGACTGCAAGGGGGATGGCTGTATCAAGACTAGTGATAAGGTTTTTTTGGGGTGGCTTGACTTCTGTTGCTGTAACATATCTTTACCTGAAAGTTTTGCAAGAGAGAAATAGTCGTAACACTGATAATTCATTCTATTTCCGGATATACCTTCTTGTTCTTGGTGTTTATGCTGCAGTACGACTATGCTTTGCACTGTTGCTCAAATTTCCAGCTTGTCATGCACTTTCAGAAATGTCTGATCAGTCATTCTTTCAGTTTTTCAAATGGATTTATCAAGAACGATATTATGTTGGACGTGGTCTTTATGAGGGAATAAGTGATTACTGCAGGTATGTGGCCTTTTGGTTGGTGGTACTTGCCTGCAAATTCACTTTTGCTTACTTTCTCCAGATTAAACCTCTTGTTGAACCTACCAATATTATTGTTGATCTTCCGTCCTTGACTTACTCATGGCATGATTTCATCTCAAAGAACAATAACAATGCCTTGACTATTGTTAGCTTGTGGGCTCCTGTTGTGGCTATTTATCTCATGGATATTCTGATTTTTTACACTGTCATGTCAGCGATTGTTGGTGGTGTGATTGGTGCACGGGCTCGGCTAGGCGAGATTCGTTCAATTGAAATGGTGCATAAGCGTTTTGAAAGTTTCCCTGGGGCCTTTGTAAAAAATTTGGTGTCACCACAAATAAAAAGGATTCCCTTGAGCGGACAATCAACCCAGGATTCTCAAGATTTGAACAAAACATATGCTGCTATGTTTGCTCCATTTTGGAATGAGATAATAAAAAGCCTGCGTGAGGAAGATTTTATTAGTAATAGAGAAATGGACCTGCTTTCTATGCCTAGTAATGCAGGAAGTCTGAGATTAGTCCAATGGCCTCTGTTTCTTCTTAGCAGTAAGATCTTGTTGGCGATTGACTTGGCTTTAGACTGCAAAGATACTCAGGCAGATTTGTGGAACAGGATAAGTAGGGATGAATACATGGCCTATGCAGTGAAGGAATGCTATTACAGTGTTGAAAAAATATTATATTCATTAGTTGGCAACGACAATGAAGGAAGACTTTGGGTGGAAAGAATATTTCGTGAGATCAATAACAGTATTGTAGAGGGTTCACTTGTTTTAACCTTGTCTCTAAAGAAGCTTCCAGTTGTTTTATCAAGACTTACGGCATTGTCTGGACTCCTGATTCGAAATGATCCTGAACTTGCTAAAGGTGCTGCAAAAGCTGTACATGACCTGTACGAAGTTGTAACTCACGAACTGGTTTCTTCAGATTTAAGGGAGAATCTTGATACATGGAACCTTTTAGCCAGAGCTAGGGATGAGAGACGACTTTTTTCTAGGATAATTTGGCCTAATGATCCAGAAATTAAAGAGCTTGTGAAGCGGTTGCATCTTCTTCTTACAGTAAAGGATTCAGCTGCAAATATTCCAAAAAATCTTGAAGCCAGGAGAAGATTAGAGTTTTTCACAAATTCATTATTTATGGATATGCCTTCAGCAAAGCCTGTTAGTGAAATGTTGCCGTTCAGTGTTTTCACTCCATACTATAGCGAAACTGTGCTTTACGGGACTTCCGAATTGCAAAAGGAGAACGAAGATGGAATATCTACTCTTTTCTATCTTCAAAAGATATTTCCAGATGAATGGGAAAACTTTCTTGAAAGAATTGGTCGAGGAGCATCCACTGGGGATGCAGAACTTCAAGAAAGTTCCAGTGATGCCTTGGAACTTCGTTTTTGGGCTTCTTATCGAGGGCAGACTCTTGCTAGGACAGTGCGTGGTATGATGTACTATAGGAGGGCTTTAATGCTGCAGAGTTTTCTGGAGAGCAGATCACTAGGAGTGGACAATTATCCTCAAAACAACTTCATTACAAGTCAAGATTTTGAATTATCTCGTGAATCACGGGCACAAGCAGATTTGAAGTTTACTTATGTTGTATCATGCCAAATTTATGGTCTACAAAAGCAGCGGAAGGCAGCAGAGGCTGCAGATATTGCTTTATTGTTACAGAGGAATGAGGCACTTCGAGTTGCTTTTATTCATTCTGACGAACCATCTGATGCAAATAGTTCAAAAGTGTTTTATTCAAAGCTTGTCAAAGCTGATATAAATGGAAAAGATCAGGAAATATATTCTATTAAACTTCCTGGAGATCCAAAGCTTGGAGAAGGAAAACCTGAAAATCAAAACCACGCAATAATTTTCACTCGTGGTGAAGCTGTTCAAACTATTGACATGAATCAGGACAATTATCTTGAGGAAGCAATGAAAATGAGAAATCTTCTGGAGGAGTTTCATGCTAATCATGGCCTTCGCCCTCCAAGCATTCTTGGAGTAAGGGAACATGTTTTTACAGGAAGTGTTTCATCGTTGGCTTGGTTCATGTCAAATCAAGAAACTAGTTTTGTAACCTTGGCACAACGAGTTTTAGCCAATCCTCTCAAAGTTCGTATGCACTATGGACACCCAGATGTATTTGACAGAATATTTCACATAACTCGAGGAGGGATTAGTAAGGCATCCCGTGTTATTAATATTAGTGAAGATATATATGCTGGTTTCAACTCCACATTGCGGCTTGGAAATATCACACACCATGAATACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTGAATCAGATCGCACTCTTTGAGGGAAAAGTGGCTGGTGGTAATGGAGAGCAGGTTCTTAGCAGGGATATTTACAGGCTTGGACAACTTTTTGATTTCTTCAGAATGCTTTCTTTCTTCTTCACAACTGTGGGTTATTATGTCTGCACCATGATGACAGTTCTTACCGTATATGTATTCTTATATGGAAGAGCATACCTGGCATTTTCTGGTCTTGACGAAGCTGTCTCAGACAAGGCAAAATTGGCGGGTAACACAGCACTTGATGCAGCTTTGAATGCTCAATTTTTGGTTCAGATTGGCGTTTTTACTGCAGTACCAATGATAATGGGTTTTATACTTGAGTTAGGACTGCTGAAGGCTATTTTCAGTTTCATCACAATGCAACTACAGTTGTGTTCTGTCTTCTTCACGTTCTCATTGGGAACTAGAACTCACTATTTTGGACGTACCATTCTCCATGGAGGTGCAAAATATCGAGCTACTGGTAGAGGCTTTGTTGTCCGTCACATAAAGTTTGCTGAAAATTACAGACTATATTCTAGGAGTCACTTTGTCAAAGCGCTTGAAGTGGCACTGCTTCTTATAGTTTATATAGCATATGGGTATGCAGAGGGAGGTGCTGTTACCTATGTTTTGGTAACTCTTAGCAGTTGGTTCCTTGTCATTTCTTGGCTTTTTGCACCTTACATTTTCAATCCCTCTGGTTTCGAGTGGCAAAAGACTGTGGAAGATTTTGATGATTGGACAAGTTGGCTTCTTTACAAAGGAGGCGTAGGGGTAAAAGGAGAAAATAGTTGGGAGTCTTGGTGGGACGAAGAACAGATGCATATCCAAACTTTGAGGGGTCGCATTTTGGAGACAATTTTAAGTGCAAGGTTCTTCTTGTTTCAGTATGGCATTGTGTATAAGCTCCATCTTACTGGAAAAGATACATCGCTTGCGGTATATGGATTTTCGTGGGCTGTCTTGGTTGGAATTGTCTTGATATTTAAGATCTTTACCTATAGCCCAAAAAAGTCAGCCGATTTTCAGCTAGTGTTGAGATTTTCCCAGGGAGTCGTATCTATCGGCCTTGTTACAGCTGTGTGTCTTGTTGTTGCCTTTACTAGACTGTCAATAGCTGACCTTTTCGCAAGCATCCTTGCATTTATCCCTACTGGATGGGGAATCTTATCTGTAGCAATTGCGTGGAGGAAGATAGTTTGGAGTCTCGGATTGTGGGATTCTGTCCGTGAGTTCGCTAGAATGTATGATGCTGGAATGGGTGTGATCATCTTTGCACCAATAGCATTTTTATCATGGTTTCCTTTCATTTCCACTTTCCAATCTCGCCTTCTGTTCAATCAAGCCTTCAGCCGTGGTCTTGAAATCTCTCTCATCCTTGCTGGAAATAAAGCCAATGTTGAGGCTTAG 5727 0.4054 MVRARENWEKLVRATLKREQLRNAGQGHARVPSGIAGAVPPSLAETTNIDLILQAADEIQSEDPNVARILCEQAYSMAQNLDPNSHGRGVLQFKTGLTSVIKQKLAKKDGVRIDRNRDLENLWKFYLHYKQRHRVDDIQREEQRLQESGTFSSSLGELKLRSSEMRKIIATLRALVEVLEALSKDADPNGVGGLVVEELRKLKKSSVTLSGELTPYNIIPLEAPSLTNPIRIFPEVKAAISAIRYTDQLPRLPAGFKISGQRDADLFDLLEFVFGFQKDNVRNQRENVILMIANKQSRLGIPAETDPKIDEKTINEVFLKVLDNYIRWCRYLRIRLAWNSLEAINRDRKLSLVSLYFLIWGEAANVRFLPECICFIFHNMAKELDAILDHPEAAPAVSCVTDDGSAKFLEKIICPIYDTLAAEASRNNNGKAAHSAWRNYDDFNEYFWSPACFELNWPMRPDSPFLRKPTPSKRSKRTGKSSFVEHRTFLHLYRSFHRLWIFLALMFQALTIIAFNHGHIDVDTFKKILSIGPSFAIMNFSKSFLDVLLTFGAYTTARGMAVSRLVIRFFWGGLTSVAVTYLYLKVLQERNSRNTDNSFYFRIYLLVLGVYAAVRLCFALLLKFPACHALSEMSDQSFFQFFKWIYQERYYVGRGLYEGISDYCRYVAFWLVVLACKFTFAYFLQIKPLVEPTNIIVDLPSLTYSWHDFISKNNNNALTIVSLWAPVVAIYLMDILIFYTVMSAIVGGVIGARARLGEIRSIEMVHKRFESFPGAFVKNLVSPQIKRIPLSGQSTQDSQDLNKTYAAMFAPFWNEIIKSLREEDFISNREMDLLSMPSNAGSLRLVQWPLFLLSSKILLAIDLALDCKDTQADLWNRISRDEYMAYAVKECYYSVEKILYSLVGNDNEGRLWVERIFREINNSIVEGSLVLTLSLKKLPVVLSRLTALSGLLIRNDPELAKGAAKAVHDLYEVVTHELVSSDLRENLDTWNLLARARDERRLFSRIIWPNDPEIKELVKRLHLLLTVKDSAANIPKNLEARRRLEFFTNSLFMDMPSAKPVSEMLPFSVFTPYYSETVLYGTSELQKENEDGISTLFYLQKIFPDEWENFLERIGRGASTGDAELQESSSDALELRFWASYRGQTLARTVRGMMYYRRALMLQSFLESRSLGVDNYPQNNFITSQDFELSRESRAQADLKFTYVVSCQIYGLQKQRKAAEAADIALLLQRNEALRVAFIHSDEPSDANSSKVFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIIFTRGEAVQTIDMNQDNYLEEAMKMRNLLEEFHANHGLRPPSILGVREHVFTGSVSSLAWFMSNQETSFVTLAQRVLANPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFFFTTVGYYVCTMMTVLTVYVFLYGRAYLAFSGLDEAVSDKAKLAGNTALDAALNAQFLVQIGVFTAVPMIMGFILELGLLKAIFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIVYIAYGYAEGGAVTYVLVTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGENSWESWWDEEQMHIQTLRGRILETILSARFFLFQYGIVYKLHLTGKDTSLAVYGFSWAVLVGIVLIFKIFTYSPKKSADFQLVLRFSQGVVSIGLVTAVCLVVAFTRLSIADLFASILAFIPTGWGILSVAIAWRKIVWSLGLWDSVREFARMYDAGMGVIIFAPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVEA* 1909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0687 1908 Pfam 1,3-beta-glucan synthase component 1034 1806 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vra5g0687 1908 SMART FKS1_dom1_2 347 460 IPR026899 -
Vra5g0687 1908 PANTHER BNAC03G35120D PROTEIN 1 1906 - -
Vra5g0687 1908 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1906 - -
Vra5g0687 1908 Coils Coil 1903 1908 - -
Vra5g0687 1908 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 457 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0687 Vra-Chr5 10996238 11058162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0687 1 1908 Glycosyltransferase AT2G36850 77.088 0.0 3082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0687 K11000 - gmx:100777959 3567.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0687 5 10996238 11058162 Vra5g0687 5 10996238 11058162 ECH