Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0683 ATGGGGAAGAAGACGAAGAAACCCGGTAAAGGCAAAGAGAAAACTGAGAGAAAAACCGTAAAAGCCGAAGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTTTCTCCCGAGGACGATATCGACGCCATTTTGTTGAGCATTCAAAAAGAGGAAGCGAAGAAGAAGGAGGTTCACGTCGACGACAACGTTCCCGCGCCTTCTCCTCGCTCCAACTGCTCGCTCACCGTCAATCCGTTGAAAGAGACCGAGTTGATTCTCTATGGCGGCGAATTCTACAATGGCAACAAGACCTTCGTGTACGGCGATCTCTTCCGGTATGACGTGGAGAAGCTGGAATGGAAATTGGTTTCGAGTCCTAATAGTCCTCCTCCGCGCAGTGCTCACCAAGCGGTTGCGTGGAAGAATTATATTTATATTTTTGGTGGTGAGTTTACGTCTCCAAACCAAGAGCGGTTTCATCACTACAAGGATTTTTGGATGTTGGACCTGAAAACAAATCAATGGGAGCAGCTTAATTTGAAAGGGTGCCCTAGTCCTCGTTCAGGACATCGAATGATATTGTACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGACACTCTCCGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTCAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGCACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGATATATTTTTGTATGGTGGCTATTCAAAAGAAGTTTCATCTGATAAGAACAACTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCACTCGATCCTAAGACTTGGGAATGGAACAAGGTGAAGAAAAGTGGAATGCCTCCTGGTCCCCGTGCTGGGTTTTCAATGTGTGTTCATAAGAGGAGGGCTCTGCTATTTGGTGGTGTTGTGGATATAGAAGTTGAAGGTGATGTAATGATGAGCTTGTTTTTGAATGAACTTTACGGGTTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCCACAAAAGATAAGTTAAAAAAAGCTGAACAAAGTTGTCCTGATGATGTCAACAAGAAGATAAATCCAGCATATACAACAAGAGAAGAAACTGTGGACTCAGCGGATGAAGAAAGCAGCATTGATGATATATCCAAAAATATAGCATCAAACATGTCTCTTGTTGATAGTGAAAATCATACCAACTCTGACGGAAAGCCCAAGGAATCTGGTGCTAAATTGGACATTCAAAGTTCTTTGCCTGAGGTAGTGAAGCCCTGTGGACGTATTAATGCTTGCATGGCCGTTGGAAGAGACACGTTATATATATATGGTGGAATGATGGAGATTAAAGATCAAGAAATCACTCTTGACGATCTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAGTGCATTATACCGGCTTCAGAATCTGAATGGGTGGAAGCTTCAGAAGATGATGAAGAAGATGAAGATGGTGATGAAGATGAGTCTGATGAGAGTTCAACTAATGAGGATGATGAGGAAGAAGAGGAGGAAGAGAATGCATCAGTTGAGGTGGGAGATGCTGTTGCTCTAATCAAAGGTGTTGGAAAGAATCTGCGGAGGAAAGAAAGGAGGTCACGGATAGAGCAGATTAGAGCCAGTCTTGGCTTGTCGGATTCACAGAGAACACCAATGCCAGGAGAATCCCTGAGGGATTTCTACAGGCGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTCCGCAAGGATGGTTTTGATCTCGCTGAAGCACGGTACAGAGAGCTAAAACCTATTCTTGACGAGCTGGCTCTATTAGAAGCTGAGCAGAAAGCTGAGGAGGCTGAAGGGCCAGAAACTAGTGCAAAGAAAAGAGGAAAGAAGAAAACTAGAAATTGA 1971 0.4297 MGKKTKKPGKGKEKTERKTVKAEEKKARRETKKLSPEDDIDAILLSIQKEEAKKKEVHVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKTFVYGDLFRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMILYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPTARSGFQLFVYQDDIFLYGGYSKEVSSDKNNSEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEGDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKLKKAEQSCPDDVNKKINPAYTTREETVDSADEESSIDDISKNIASNMSLVDSENHTNSDGKPKESGAKLDIQSSLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASEDDEEDEDGDEDESDESSTNEDDEEEEEEENASVEVGDAVALIKGVGKNLRRKERRSRIEQIRASLGLSDSQRTPMPGESLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEGPETSAKKRGKKKTRN* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0683 656 MobiDBLite consensus disorder prediction 494 532 - -
Vra5g0683 656 MobiDBLite consensus disorder prediction 1 35 - -
Vra5g0683 656 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 649 - -
Vra5g0683 656 MobiDBLite consensus disorder prediction 355 429 - -
Vra5g0683 656 Pfam Galactose oxidase, central domain 446 488 - -
Vra5g0683 656 Pfam Galactose oxidase, central domain 186 228 - -
Vra5g0683 656 Pfam Galactose oxidase, central domain 68 122 - -
Vra5g0683 656 MobiDBLite consensus disorder prediction 634 656 - -
Vra5g0683 656 Gene3D - 42 367 IPR015915 GO:0005515
Vra5g0683 656 SUPERFAMILY Kelch motif 82 485 IPR015915 GO:0005515
Vra5g0683 656 Pfam Galactose oxidase, central domain 135 185 - -
Vra5g0683 656 Pfam Domain of unknown function (DUF4110) 565 650 IPR025183 -
Vra5g0683 656 MobiDBLite consensus disorder prediction 396 412 - -
Vra5g0683 656 Pfam Kelch motif 235 297 - -
Vra5g0683 656 MobiDBLite consensus disorder prediction 491 536 - -
Vra5g0683 656 MobiDBLite consensus disorder prediction 12 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0683 91 314 Acyl Lipid Metabolism Gene Families AT3G05420 28.151 3.32e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0683 - - gmx:100818228 1127.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0683 5 10921708 10937897 Vra5g0683 5 10921708 10937897 ECH