Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0656 ATGGTGTTGAACAGCATGGAGAAGCCATCGTCGTCGCGAAAATCGAGCACGAAGGTGAAAGCTTCGAGCGATGCGAACACCAGCTTGAGTATGCTGAATGAGGATCTTCTTCAGAACATTCTAGCGAGGCTTCCTGCTGTACCATTCGCTTCCGCAGCCTGCGTCAGCAAAGCATGGAACTCTCTCTGCAATCGCATCCTCTCTCGTCCCAAACTCTCTTCTGCGCTCTCTCTCAACCCTTCGCTCCCCGATGCTGTTAACGAGGTTGTGCAAAGGGTTCTGTCGGAGCCAATTCGACCACATTTTGCTATTGCCAATACTGGAACAGGATTCTGCACTTCCAAGACTCTGCGGCTTATTAGACAGTCATTGGGATCTAATATTCCCATTATTGTTACCGTGGCAAATGGTATTATTGGAAGGGATGCTATTACTGACGAGTTTAAAGAGGTCAAATGGGGTGCCCTTTTTAGTGGCTTTGGTGAGGAAACATATGCAAAGTCTATAAACGAAGGCTTAGTTTTGACTGTTGGCTACTTGCCGGGATTGAAAGTCGAAGCTGTGCCGTTGCGGCGGCCACAAAAGTCATCTCAAGCACCTTGGGTCGACAATTTTATTAAGGATATTAAGGAATATTCCGCCATTGCCTCAGGTCGCCAGTTCCCTGTTGGGATCATATTGTTTGGAGAAGCAAGCAGTGACATGAAATTGGTTCTGGAGAAATTGGATTATGCTATGCCAATGGAGACTATCGTTGTGGGTGATGAGAGAGGCTCCTTTGACTTTGTACACAAAAGTGGGAATGATTCTAGAATCATTTGTAGTAAAAGAGGAAACGTAGAAGCTGTTGCTCTGGTATTTGCTCAGGACAGAGACAGGTCTTTGGGAACTATTAGGTTTCATGTTGCATTGTCAGATGGTGTTTCAACTGTGGGTCCCAGATACAAGGCAGCCTCAGTTAGATCAAACCCCACTGATTGTGCAACATGGCTAACTGCTAGGAGGGAAGGGCAACAAGAACTTCTTGATGGTCAGAGTATTCTACTTGATATCAATAATTTGCTGGACAATCATATTGAATCTCCCGATCTGTACATCGGGGTAATTAAACATAGGAAATTCTCCACGGGAGCAGAGAAGCCAATGCCAAGAACCTGTGTTGCATATCATGGAATTGTGGGAGGTGATGAAGAGTATCTGTATGTGGACGGCATCGGCATAAAAACAGGAGATTTCTTTCAATTCTACTTTTCAGATCCGAACACTGCCTCAGCCTCATTAACCAAGGTCCATGAAGCCCTCAAGAATATTACACTGGAAAGAAATTCCAAGAGTTTCAAGGGTGATGGAGACAGTGCTGCCAATGTTTTTGGAGGTCTAATCTTTGCTTGTTACGGCCGGGGAGAATCGTTCTTTGGACGTCCCAATGTTGATAGCTCCCCTTTCTTGGAGAATTTTCCAGGAGTGCCTTTTTCTGGAATATTTTGTGGTGGAGAAATGGTGCGCCCCTGTACCACTGTGATTGGTCAATGTGAAGGAGCAAGCCCCTTTAGTTGTTGTCTGCATGTCTACAGCACTGTCTACTTGGCAATGTCTTATACTCCTCCCTCTGTGGAAGATTAG 1623 0.4547 MVLNSMEKPSSSRKSSTKVKASSDANTSLSMLNEDLLQNILARLPAVPFASAACVSKAWNSLCNRILSRPKLSSALSLNPSLPDAVNEVVQRVLSEPIRPHFAIANTGTGFCTSKTLRLIRQSLGSNIPIIVTVANGIIGRDAITDEFKEVKWGALFSGFGEETYAKSINEGLVLTVGYLPGLKVEAVPLRRPQKSSQAPWVDNFIKDIKEYSAIASGRQFPVGIILFGEASSDMKLVLEKLDYAMPMETIVVGDERGSFDFVHKSGNDSRIICSKRGNVEAVALVFAQDRDRSLGTIRFHVALSDGVSTVGPRYKAASVRSNPTDCATWLTARREGQQELLDGQSILLDINNLLDNHIESPDLYIGVIKHRKFSTGAEKPMPRTCVAYHGIVGGDEEYLYVDGIGIKTGDFFQFYFSDPNTASASLTKVHEALKNITLERNSKSFKGDGDSAANVFGGLIFACYGRGESFFGRPNVDSSPFLENFPGVPFSGIFCGGEMVRPCTTVIGQCEGASPFSCCLHVYSTVYLAMSYTPPSVED* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0656 540 MobiDBLite consensus disorder prediction 1 24 - -
Vra5g0656 540 Gene3D - 12 67 - -
Vra5g0656 540 SMART fbox_2 32 72 IPR001810 GO:0005515
Vra5g0656 540 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 28 539 - -
Vra5g0656 540 SUPERFAMILY F-box domain 27 64 IPR036047 GO:0005515
Vra5g0656 540 Pfam FIST N domain 115 323 IPR013702 -
Vra5g0656 540 PANTHER F-BOX ONLY PROTEIN 22 28 539 - -
Vra5g0656 540 Pfam FIST C domain 406 501 IPR019494 -
Vra5g0656 540 SMART FIST_C_2 347 503 IPR019494 -
Vra5g0656 540 Pfam F-box domain 29 67 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0656 - - gmx:100815778 943.34