Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0644 ATGGCCACCGAAACCCTAGAAGACAACCAGCCTCCCCTCCATGACGATGACGACCTCGCCAAACCCCAACCCAACCCTGCAATTCCCGACAAAGATGCTTCCGAGGACGCTGCCAAATCCGAGGACGCAAATGTCGAGGACAAGGCCAGAACTGACTATCCCGGAGTAGAAGAGGAAGAGCCACCTCAGAAGAAAGAGGAGATCGACGAGGATGAAGAAGATGAGGAAGAAGAAGAGGATGACGAAGCCCAAGAGAAAGAAGAGACGGTCAAGGCTAAGGGACGTAGCAAAGAGACTCCAAGTAAGTCAAAGAAGAGTAAGAAGGATGCTACGTCGGAGAAGAAGGATCCCGTTACGCCGACGAGTGAGAGACCTACGAGGGAGAGAAAAACGGTGGAGCGCTTCTCTGTGCCTTCGCCGGCGAAGTCTGGAAGGTCCTCTGCTAGTAAGGGTTTCACAATTGAAAAGGGACGTGGCACGCAGCTCAAGGATATCCCGAACGTGGCGTTTAAGTTGTCAAAGAGAAAACCTGATGACAATCTGCATATGCTTCATACTTTACTGTTTGGGAAGAAAACAAAGGCACACAATTTAAAGAGAAACATAGGCCAGTTTTCTGGTTATGTGTGGACTGAAAATGAGGACAAACAGAGGGCCAAAATAAAGGAGAGGATTGATAAATTTGTCAAAGAAAAGTTGTTGTACTTCTGTGATGTTCTTAATATTCAGATAAACAAGGCCAATGCAAAAAAGGAGGAGCTGTCTGCAAAGTTGTTGGAATTTTTGGAGTCCCCACATGCTACAACTGACATTCTACTTGCTGATATAGAGCAGAAAGGTAAAAAGAGATCCAGAAAGTTAACCCCTAACAAGTCTCCAGGGGAAGCATCTATAGAGATACCTTCTAAGAAGCAAAAACAAACTTCCCAATCTGGGAAAAAGCAAAAGGAGTCTTCTGATGAGGATGAAGATGATAAAGCTGAAATTTCAGATGCAAAAGATGATTCTCAGGAAGATGAAGATGTTCCTGCACCAAACAATGAAAGTGATGAAGAGGAAAGTAAATCAGAGGAAGAGGAAGAGAAACCAAAGTCTCGCAAGCGTGCTTCCAATAAAGCTGTTAAAGAGAGTTCAGTTGGTAAAACTGTAGATAAAACCTCAACTGTCAAGAAGACCTCTGTGAAAGATGCCAAGAACATTGAAAAGACTCCAAAAAAAACATCAAAGAAAACTGTTGCTGAGCATGACAGTGCTTCTGCCTCCATTTCCAAGCCAAAGCAACCTGCATCCAAGAAACCGAAAACTGTAAGTGAAAAGCAGGATGCTAAGGGGAAGGCCTCAAGCAAAAAACAAACTGACAAATCTTCAAAGACTTTGCTTAAGGATCAAGGGAAAAGTAAAAGTAATAAGAAGGCCAAGACTGAACCTACTAAGACGGACATGCATGCTGTAGTTGTTGATATTTTGAAGGAAGTAGATTTCAATACTGCAACTTTGTCCGATATACTCAGGCAACTTGGTACCCACTTTGGTATGGATTTAATGCACAGAAAAGCAGAGGTGAAGGATATAATTACGGACGTAATTAATAACATGTCTGATGAGGAAGATGAAGAAGAAGCTGAGAATGATGATGATGCAGATAAAGATGATGACGGTGATGAGGATGATGCGTGA 1677 0.4311 MATETLEDNQPPLHDDDDLAKPQPNPAIPDKDASEDAAKSEDANVEDKARTDYPGVEEEEPPQKKEEIDEDEEDEEEEEDDEAQEKEETVKAKGRSKETPSKSKKSKKDATSEKKDPVTPTSERPTRERKTVERFSVPSPAKSGRSSASKGFTIEKGRGTQLKDIPNVAFKLSKRKPDDNLHMLHTLLFGKKTKAHNLKRNIGQFSGYVWTENEDKQRAKIKERIDKFVKEKLLYFCDVLNIQINKANAKKEELSAKLLEFLESPHATTDILLADIEQKGKKRSRKLTPNKSPGEASIEIPSKKQKQTSQSGKKQKESSDEDEDDKAEISDAKDDSQEDEDVPAPNNESDEEESKSEEEEEKPKSRKRASNKAVKESSVGKTVDKTSTVKKTSVKDAKNIEKTPKKTSKKTVAEHDSASASISKPKQPASKKPKTVSEKQDAKGKASSKKQTDKSSKTLLKDQGKSKSNKKAKTEPTKTDMHAVVVDILKEVDFNTATLSDILRQLGTHFGMDLMHRKAEVKDIITDVINNMSDEEDEEEAENDDDADKDDDGDEDDA* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0644 558 MobiDBLite consensus disorder prediction 530 558 - -
Vra5g0644 558 PANTHER OS01G0924900 PROTEIN 37 552 - -
Vra5g0644 558 MobiDBLite consensus disorder prediction 414 430 - -
Vra5g0644 558 MobiDBLite consensus disorder prediction 1 158 - -
Vra5g0644 558 Coils Coil 237 264 - -
Vra5g0644 558 MobiDBLite consensus disorder prediction 86 135 - -
Vra5g0644 558 Coils Coil 65 93 - -
Vra5g0644 558 MobiDBLite consensus disorder prediction 279 480 - -
Vra5g0644 558 Pfam DEK C terminal domain 476 528 IPR014876 -
Vra5g0644 558 MobiDBLite consensus disorder prediction 140 154 - -
Vra5g0644 558 MobiDBLite consensus disorder prediction 431 480 - -
Vra5g0644 558 MobiDBLite consensus disorder prediction 358 374 - -
Vra5g0644 558 MobiDBLite consensus disorder prediction 388 413 - -
Vra5g0644 558 MobiDBLite consensus disorder prediction 322 357 - -
Vra5g0644 558 Gene3D - 468 531 - -
Vra5g0644 558 PANTHER DEK PROTEIN 37 552 IPR044198 GO:0003677|GO:0006325
Vra5g0644 558 MobiDBLite consensus disorder prediction 32 62 - -
Vra5g0644 558 MobiDBLite consensus disorder prediction 63 85 - -
Vra5g0644 558 SUPERFAMILY DEK C-terminal domain 469 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0644 Vra-Chr5 9959600 9965508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0644 K17046 - gmx:100813123 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0644 5 9959600 9965508 Vra5g0644 5 9959600 9965508 ECH